Scylla paramamosain (green mud crab): 135089663
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Entry
135089663 CDS
T11531
Name
(RefSeq) LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 3-like
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
sprm Scylla paramamosain (green mud crab)
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sprm03036
]
135089663
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sprm00535
]
135089663
Chromosome and associated proteins [BR:
sprm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
135089663
Meiosis-specific proteins
Cohesin complex and associated proteins
135089663
Proteoglycans [BR:
sprm00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
135089663
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_23
AAA_21
AAA_29
Motif
Other DBs
NCBI-GeneID:
135089663
NCBI-ProteinID:
XP_063841630
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All DBs
Position
3:6480408..6518313
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AA seq
1200 aa
AA seq
DB search
MYIRQIIIQGFKSYREQTVIDPFDPRHNVVVGRNGSGKSNFFYAIQFVLSDEFNHLRAEQ
RQALLHEGTGPRVISAFVEIIFDNADGRIPIDKNEVCLRRVIGAKKDQYFLNRKAVTKLD
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERREESKVILK
ETQSKREKIEEFLRTIEDRLKTLEEEKEELKEYQKYDKMRRALEYTIHDRELKETRKKLD
DMENQRKNSGAEQEQLRQQLQKAQESIKTQSKEMKEIKSKLSQVKEERDTFNMEQQQLLK
EKTKLEFTIKDLADEVQGDNKSKERAEKELQKLRATIAQKEAELEAIRPKYEENKAREEE
AQHELSLKDQKRKELYAKQGRGSQFTSKEQRDQWIQKELRSLNKAVKSKQDQIQRLEDEI
VRDSERRTQLVSKVEELSTDTENYRQSIDEHNKVFYEMKKRKDQLQSERNEHWRKENNLQ
QNVSSLKEELSRADQSLRSMAGKPILNGRDSVQKVLDTFRERGGHLGEIAEQYYGLLIEN
FECERSIYTAVEVTAGNKLFHHIVESDKIGTQILKEMNKQKLPGEVTFMPLNRLTVKDID
YPQTNDAIPMVSKLTYSDRYHKALKYIFGRTLICRNLEVATHLARSTRLDCVTLDGDQVS
SKGSLTGGYFNTSRSRLEIQKTRSELRDQITSAETELRTLQETLRNTEQEINKIVSEMQK
TEIKNSKAKNLFEKVKTDIRLMKEEQSGLERTKQPKERSLTQLKASLEAMMATKEGLESE
LHQDLMATLSVQDQHEVDQLNDDIRRLTQDNKEAFTRRMKLEADKNKLENLLTNNLHRRK
DELMQALQEISVEDRKRQLEHSQSEIQRVDSRIEEVAVQYKEVEKKVTELQKKEKSLKVE
LEKVKSREKEVMERMEEDAKDLEKMASKQTLLHQKIEDCSKKIRDLGSLPSEAFDKYQNL
PTKQLFKKLENANMELKKYSHVNKKALDQFISFSEQKEKLVMRKEELDRGYDKIKELMNV
LEHRKYEAIQFTFNQVSKYFSEVFKKLAPQGHAQLVMKSDNEDESEQEEQGTVDNFTGVG
IRVSFTGRNAEMREMNQLSGGQKSLVALALIFAIQKCDPAPFYLFDEIDQALDAQHRKAV
ADMIHELSKDAQFITTTFRPELLEHANKFYGVKFRNKVSHVECVSREEAYDFVEDDQTHG
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgtatattagacaaattattatccaaggtttcaagagttaccgtgaacagactgttata
gatccttttgatccacgtcacaatgtagttgttggtcggaatggctctggcaaaagcaac
ttcttctatgctattcagtttgttcttagtgatgaattcaaccatctcagggcagaacag
cgccaggccctcctccacgagggtactggcccacgtgtcatatctgcattcgtggagata
atctttgacaatgcagatggcaggataccgattgacaaaaatgaagtgtgcctgcgaaga
gttattggtgccaaaaaagaccagtattttcttaacagaaaagctgtaacaaaattagat
gtcatgaatttacttgagtcagctggattctccagatctaatccatactacattgtaaaa
cagggtaaaattaatcagatggccacagcccctgattcacagaggctgaagttgttaaga
gaagtggctggaaccagagtatatgacgaaaggagagaagaatccaaagtaattctcaaa
gaaacacaaagcaagagggaaaaaattgaagaattccttcggacaattgaagatagattg
aagaccttggaagaggagaaagaagagctaaaggaataccagaagtatgacaaaatgcgc
agagcacttgagtacaccattcatgatcgtgagctgaaagaaaccagaaaaaagctggat
gatatggaaaaccaacgcaagaattctggtgctgagcaggagcagttaagacaacaactt
cagaaagctcaagaatcaatcaaaacacagtccaaagaaatgaaagaaataaagtctaag
ttatcacaagtcaaagaagaaagagacacattcaacatggaacagcagcagctactaaag
gaaaagaccaagttggaatttacaattaaggatctagcagatgaggtgcagggtgacaac
aagtcaaaggaaagggcagagaaagagcttcaaaaattgcgagccaccattgcccaaaaa
gaagcagagctggaagccatcagaccaaagtatgaggagaacaaagcaagagaggaagaa
gctcagcatgagctgtccttgaaagatcagaaacgaaaggaactgtatgccaaacagggc
agaggcagtcaattcacctccaaagaacagcgagatcagtggatccaaaaggaattaagg
tctctcaacaaggctgtcaagtccaagcaggatcaaattcagcgactggaagatgaaatt
gtccgcgatagcgagcgcagaacacaacttgtttcaaaagttgaggagttatctacagat
acagagaactacagacagagtattgatgaacacaacaaagtcttttatgaaatgaagaaa
agaaaagaccagttacagagtgaacggaatgagcactggcgaaaagagaacaacctacag
cagaatgtgagctccttaaaggaagagctatcaagagctgatcagtcccttcggtcaatg
gcagggaagccaattctaaatggtcgtgatagtgtgcagaaggtgcttgacacatttaga
gaacgtggtggccatcttggagagattgctgagcaatattatggtctccttattgaaaat
tttgagtgtgagagatctatctatacagctgtggaagtgacagctggcaacaagctgttc
catcacattgtggaatctgataagattggaacacaaatcttgaaggaaatgaacaagcaa
aaactgcctggtgaagtaacattcatgcctctcaaccgccttactgtgaaggatattgat
tatccacaaacaaatgatgccatccctatggtcagtaaacttacctattcggaccggtac
cacaaggccctgaagtacatttttggacgaacattgatctgtcgtaatctggaggttgcc
acacatctggctcgctccactcgccttgactgtgttacattggatggtgatcaggtctct
agcaaaggatctcttactggaggttatttcaacacttcaagatcaagattagaaatacag
aagacaaggtctgaacttcgagaccaaattacttcagcggagactgagcttagaacttta
caagagacgctcagaaatactgaacaagaaataaataaaattgtatctgaaatgcagaaa
actgagataaaaaacagtaaagctaaaaatttgtttgagaaagtgaaaactgatattcga
ttaatgaaagaagaacagtcaggtttagagcgcacaaagcaacctaaggagaggtctttg
actcagctgaaggctagcttggaagctatgatggccactaaggaaggattggagtctgaa
cttcatcaagaccttatggcaacgcttagtgttcaggaccaacatgaagtagaccagtta
aatgatgatatcagacgacttactcaagataacaaggaagcctttactcgacggatgaaa
cttgaggctgacaaaaataaacttgaaaaccttctcacaaataatcttcacagaagaaaa
gatgaactcatgcaggccttgcaagaaatctctgtggaagaccgaaagcgtcagctagag
catagccagagtgaaatccagcgagtggattcacgaatagaggaggtagctgtacagtac
aaagaagtggagaagaaagtcacagaacttcaaaagaaggaaaagagcttgaaagttgaa
ttagaaaaggttaagtcaagagaaaaggaagttatggaacgaatggaagaagatgccaaa
gatttggagaagatggcttcaaaacaaactcttcttcatcagaaaattgaggactgttct
aagaagattcgtgatcttggatctttgccttctgaggcttttgataaatatcagaatctt
cccactaaacaactcttcaaaaaactggaaaatgcaaacatggagctcaaaaaatattcc
catgtaaacaagaaagcattggaccagttcatctcattttctgaacaaaaggaaaaattg
gtgatgaggaaagaggagttagacagagggtatgacaaaatcaaagagctaatgaatgtc
cttgaacaccggaagtatgaagccatccaatttacctttaaccaagtatccaaatacttc
agtgaggtgttcaagaagcttgcaccacagggacatgcccagttggtcatgaaatcagac
aatgaagatgaaagtgagcaagaagagcaaggaactgtggacaacttcactggtgttggc
atccgtgtatcgttcacgggaagaaatgcagaaatgagggaaatgaaccagctgtctggt
ggacaaaagtcacttgttgctcttgctcttatttttgccattcagaaatgtgatcctgct
ccattctatctctttgatgaaattgatcaggcccttgatgcacaacacaggaaggctgtg
gctgacatgatccatgaactgagtaaggatgctcaatttattaccactactttcaggcca
gaacttctggaacatgcaaacaagttctatggtgtaaagttcagaaataaagtgtctcat
gttgaatgtgtgtcacgagaagaggcttatgattttgttgaagatgaccaaactcatggt
tag
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