Scylla paramamosain (green mud crab): 135089853
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Entry
135089853 CDS
T11531
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm04140
Autophagy - animal
sprm04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135089853
04148 Efferocytosis
135089853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sprm04131
]
135089853
Membrane trafficking [BR:
sprm04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
135089853
Hops complex
135089853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
zf-C3HC4_2
TPR_Vps41
zf-RING_2
Clathrin
zf-C3H2C3
zf-C3HC4
zf-rbx1
zf-RING_5
WD40
zf-ANAPC11
Beta-prop_WDR3_1st
zf_RING_Vps8_fungal
zf-RING_UBOX
Beta-prop_WDR36-Utp21_1st
Motif
Other DBs
NCBI-GeneID:
135089853
NCBI-ProteinID:
XP_063842051
LinkDB
All DBs
Position
33:complement(17590508..17606371)
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AA seq
1213 aa
AA seq
DB search
MAALLQWRKFSFFDVTANIDGGQLAEALKGAEVTCTAGGRGQVYIGDSAGCVHGLNRQLK
VSTFVAHGQPVRSITAFDHTSIVITIADGSPGTPSEVKVWSPDKLDSQGRPTCLRSLAPD
PRPAPASQRQSQASQSGPSRNQVPHVTTLAVHPNLSLMAVGFSDGSIMLYRGEVSRERGS
KHKVLLTVSSGLTSLHLRHTTRSTHLFATTRTHTYCINLTVRDKETTVELDGLGCEPGCS
TLADGRHEHHFLVARPDALYSYTSDSRGSCYVFEGEKTLVAWFRGYLIVAAADKGGPTTR
SGERSITVYDLTNKLVALSTRVRGLAGVVGEWGGLYLVTTEPSLIHMSEKDLHSKFQLLF
KKNQFDIAISLAKTQCCDQEEVAEILKQYGDWLYSKGNHAAAMDQYLKTVPHLEPSYVIR
KYLDTQHIHNLTTYLQALHRTGSATADHTSLLLNCYTRLRDTQQLNEFIMSKEGAVECDV
ELGVRVCRSAGYYDHALALAARHGLHHHHLAILIDDKKDYSAALRYMATLELEEVKANVL
RYGSVLLNHVPDETTELLISLCTDYKPSNSPIVKEGSLDSYPTPEDPVRADPEEFEYLLV
GHSEQAITFLERLTDPHNPSRQLLSPRLYTTLLAEYLHQYSLAPEGQDQVALGEKVLALL
RNPDTKVCRDQALLLCDKHKFHDGKLLLWEQAGMFEEMLAWHGERGETEAALAVCSRKAQ
QQPSLWCSFLRQLASASSPSPPNPHHLSTCLNNIEEKGLMPALEVMEVLASSPHITLGQV
RDYLLGVVASHSSTLAAEASRSQQYAQETAKMRDTIRDLRTGATQFTATKCNICNNELEL
PSVHFLCRHSFHQHCFESYSESDADCPMCLPENKKMMDIIKAQETHRSQHDHFHEQLERS
SADAFTVVADYLGRGVFTHLQSLSALYPRLNTTKIATAGGRGGGGGKGAEQIKRNEVADS
SQEGGRGTRHYHTPHQNNTASVPEVESRLRALERTLPGTAGMGSEGRLRVKEGKGLAVLE
PESEARIRLEGKPGLSKFSSSGGSVRPNDPNASKALTSPSEAQLRSSLSSSILVPSPEGR
VRGGETSRMGAGASSPSLHDHITRSPHTTRSADKRTMNQAVESISSALASTQVSSSPKNK
PSDNPFQEEDSATGGNPFGDFETENLESNPFADDYDESKNPFAADTPSTTSPDPKNPFES
DNYDSSLNPFAES
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgctgctacagtggaggaagttcagtttctttgatgtgacggcaaatattgat
ggtgggcagctggctgaagctctcaagggagcagaggtcacgtgcacggctgggggtcgc
ggacaggtgtacattggggactcagctgggtgtgtgcacgggctcaatcggcagctgaaa
gtgagcacatttgtggcacatgggcagccagttcgctccatcacggcctttgaccacacc
agcattgtcatcaccattgccgatggcagccctgggactccttcagaagtcaaggtatgg
tccccagacaagctggactctcaggggcgacccacgtgcctgagatccctggcccctgat
ccccggccagccccagccagccagagacagtcccaggcgtcccagtcagggcccagcagg
aaccaggtgccccatgtcacgacgctggcagtgcaccccaacctgtccctcatggctgtg
ggcttttctgatggctccatcatgttgtacagaggtgaagtgagcagggagcgtggcagc
aaacataaggtgttgctgactgtttccagtggcctcacgtccctccaccttcgccacacc
acacgctccacgcatctctttgccaccacgcgcacccacacctactgcatcaacctcaca
gttcgggacaaggagaccacagttgagctggatggtctgggctgtgaaccaggctgctca
acactggcagacggcagacatgaacatcacttcctggtagcacggcctgatgctctctac
agctacaccagtgacagtcgagggtcatgctatgtattcgagggagagaagaccttggtg
gcctggttccgtgggtacctcattgttgcagcagcagacaagggaggcccaaccaccaga
agtggggaacgcagcattacagtgtatgacctgaccaacaagctggtggctctcagcaca
agggtgagaggcctggctggcgtggtgggggagtggggaggcctctacctggtcactact
gagccctccctcatccacatgtcagaaaaggaccttcacagcaagtttcaactcctgttc
aagaagaatcagtttgatattgccatcagcctggccaagactcagtgctgtgaccaggag
gaagtggcggagatcctgaagcagtatggtgactggctgtacagcaaagggaaccatgct
gcagcaatggaccagtacctcaagactgtgcctcacctggaaccctcctatgtcatcaga
aagtacttggacacacagcacatccacaacctgaccacctacctccaggccctgcaccgc
acaggctcagccactgcagaccacaccagcctcctcctgaactgctacacacgtctcaga
gacactcaacagctcaacgaattcatcatgagcaaggaaggtgcagtggagtgtgacgtg
gagcttggcgtgcgtgtgtgtcgcagtgctggctattatgatcacgccctggccctggcg
gctcgacatggcctccaccaccatcacctggccatcctcattgacgacaagaaggactac
tctgctgccctgaggtacatggccacactagagctggaggaggtgaaggccaacgtgctg
cgctacggctctgtcctactgaaccacgtcccagatgagaccactgagctgctcatatca
ctgtgcaccgattacaagccctccaactcacccattgtgaaggagggatccctggacagc
tacccaactcctgaggacccagtgagggcagatcctgaggaatttgagtatctgctggtg
ggacacagtgaacaggccattaccttcctggagcggctgacagaccctcacaaccccagc
aggcagctcctctccccgcgcctctacacaaccttgctggcagaatacctccatcagtac
agcctggctccagaaggccaagaccaggtggcacttggagagaaggtcctggcactgctg
cgtaacccggacaccaaggtgtgtcgtgaccaggcactgctactctgtgacaaacataag
ttccatgatggcaagcttctactctgggaacaagctggcatgttcgaagagatgctggcc
tggcatggggagcgcggggaaacggaagctgcactagccgtgtgttcccgcaaggctcag
cagcagcctagcctgtggtgctccttcctccgccagctggccagcgcctctagccccagc
cccccaaacccacaccacctctccacctgcctcaacaatatcgaagagaaaggtctgatg
ccagcgctggaggtgatggaggtgctggcctcatctccacacatcactctcggacaggtg
cgggattacctgctgggtgtggttgcctcccactccagcacactggcagccgaggcctcc
cgcagccagcagtatgcccaggagacagccaagatgcgcgacaccatcagggacctgcga
acgggtgccacccagttcactgccaccaagtgtaatatttgtaacaatgaactggagctg
ccttcagtgcacttcctctgcaggcattccttccatcagcactgctttgagagttacagt
gagagtgatgctgattgtcccatgtgcttgccagagaacaagaaaatgatggatattatc
aaggcacaggagacacaccggagtcagcacgaccacttccatgaacagctggagcgttcc
tcagctgatgccttcacggtggtggctgactatctggggcgtggggtgttcactcacctg
cagtccctgtcagcgctttaccctcgcctcaacaccaccaagattgctacagcaggtgga
agaggaggaggaggaggaaaaggggcagaacagataaagaggaatgaggtggctgattct
agtcaagaaggaggaagaggcaccaggcactaccacacaccacaccagaacaacacagct
tcggttcctgaggtggagagtcgactccgtgcactggagagaacccttccaggcactgct
ggcatgggcagtgaaggacgtctccgagtgaaggaaggcaaaggtcttgctgtgttggaa
cctgaatctgaggctcgcatacgcctagagggaaaaccaggattgtcaaagttcagctcc
agtggcggctctgtaaggcccaatgaccccaatgcatcgaaggccttgaccagtccctct
gaggctcagctgaggtcttccctgtcatcgagcatccttgttccttcccctgagggtcga
gtgaggggtggcgagacctccaggatgggtgctggagcgtccagcccttccctgcatgac
cacatcacacgctcccctcacaccaccagatctgcagataaacgcactatgaatcaggca
gtagagtccatctcctcagctctcgcctccacacaggtctcgtcctcccccaagaacaag
ccatcagacaacccattccaggaggaagactcagccactggagggaatccttttggagat
tttgaaacagaaaatttggagagcaacccattcgctgatgattatgatgagtcaaagaac
ccatttgcagctgacactcccagcaccacaagtccagatcccaaaaacccgtttgaatcg
gataactacgacagctcactcaatcccttcgctgagtcctag
DBGET
integrated database retrieval system
