Scylla paramamosain (green mud crab): 135090018
Help
Entry
135090018 CDS
T11531
Name
(RefSeq) rootletin-like
KO
K16469
rootletin
Organism
sprm Scylla paramamosain (green mud crab)
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sprm03037
]
135090018
Cilium and associated proteins [BR:
sprm03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
135090018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
CCDC39
FKBP15
PUMA_CC
ATG16
Myosin_tail_1
Rod_CreS
Tropomyosin
Rab11-FIP3
CENP-F_leu_zip
Filament
ATG17_like
DUF7491
HH_AprE
Motif
Other DBs
NCBI-GeneID:
135090018
NCBI-ProteinID:
XP_063842308
LinkDB
All DBs
Position
34:complement(1632479..1747290)
Genome browser
AA seq
1972 aa
AA seq
DB search
MDDPEMYRLEEETRYLQTEVRRLEDMLASSRAERDTVSVRYNALSDHVADEWQEYQKRLE
YFNEVHRKQTTLIDRLANKVREYRGRCRELEMRSTETTRLRETTERDLETLNMALNTAEE
RLRASEAQHTFDLETALVKLEDEQTRCEAYESQVSSMQEQVGQLESTVAGLKEERDKAQT
ALKRLTDEVKAKEEQWASESQRFNNYYISGHKSLLDLWREIGSVKRNFTEVKHLTSRDLT
ELKGDLERYAHQLTTACTTAQANMSYIPTGERDEYVVANPADLWGRIQECEKAQMRTESE
KSSLKEKINDLNSRISELNNSLRNKDRTIQDLNKKLDEGVAEAEYQETLKEKVRTLEAYM
VEIAQTVIKDAEQTGGEAEAKAPSAFRPPTFPRVGRIVRDTEQGVAPDLPQSTVSAVRTA
LSNRQVQIHELQLKLNSSKDQLTSLRKQYESAEASQRSLEATISELRDELEAVVRQREEV
TREKDRLTEDLDAISAEKNSLEKTRQSLKTQLESAQEEASRKSRHISELEKEKTALGEER
AYLNTRLAKEKEEVQKHTHTISVLNSELASVHQQVTVLSESLGKVRAAEERLDQEKDDLR
DQIRSMERQRADLEAKLAHSLRQEMDMREALEKVEAYSITLGQDKSQLVAKITSLETERA
ALSTERAELRSDIERLKDDLEALSEERASHEASITALNEKIVLLNVEKEKIELELTDTIS
ERNELHGQLAALERIKTSLEGEVTALNNTIMEKSRLVDQLNSDKESLTKENAEMEVRLSG
AEKELSVLRDTLSTLKTEKQSLESFASSLEKKWSASEARRTQLEKEAQQLTADKEKLHTQ
MNKLQRELEGELAKAREARTALERRLDEKETEHKKALMALRDQHEETLDSLRKEKNNIVT
ELEDKLNMSIHSMKIERDELELKKDQEISSLKRLTEKLQRDKDDSTLRFEEEKHRSMMLA
QQEIASLEEKVAGLQRDLSSYESQLEQLRRDGSSKAEAGRASEGALHNKIIQLKEELHSN
SQAFEKQLKDEKDSYERRIRELQLRLDDARREGEVEATTIKTDLRLAREDVCRLQQDLED
AEEKLKDAEEKRASLKKEISRLNEDMRSSEERRSTELQTFIKKADQEKKDLQKRLDDKEN
KLSSLEISEAKHADLIARMTAQLRELNAVKQEAQRETSELKKKLQLLETEGLSKSQELEN
LRLRLSSEEDRHNESRKEATKLRTKLAEYERDRDNLQTELALLERRLTELEDHHAAKEHE
LATSLEESRANERKLNDEKKNLENYLNNANQQISNLKVKLSREEGHVEALEQQLGTLDNT
REQLEKKLQNVYASLRAVTRMYQDISPASPSLRSRKGTKIGFELSGSQTDLQASLESIGS
PEKINVAEIDPESVRHELRALMTQMNQVELERDDAVARVASLERQLSELQEVHQKSEARL
RDVTRTLSELEERKRYADDKLNKAVSQSSQQEDSLRHKESEIRSLNEELSNTRRKMSDLE
QERSTLNDRVQKLKSAVSRIEMENADIREKLRASEQRETLLDDSKSRLEAELSAAKKNTS
EKHMEIENLHASKESLNRSVRTLEDQNSSLRNKVEDLKSKLASTSKSEGELKDKLSSMNR
SLKEAMSSSGTMQEDLSRSQNLLTRNEAERRQLEERVADLQSTVSELKRQKDQLSESKNK
AQQDLSNAEIRNAELEMAMKSLKGNLGERSSTDELLSKVTRLEQEKAELRAQVADLERKL
AISEAEKKDYEKAEHRLEKDKSDLKKILNKYEHERKDHRRPQPDSHTGRPDQPYMDSSVS
SMRIENMELRRKIDDLETQNTEMQQKHLKETLEMSSDHRRERQIDSEKIRRLTNQMEAIR
QEKERCELRIHSLEQQIAQYRDQIREYRNRSSAVAANVRRIRTSMTDSLHTIGTHPRVSS
GVLDTEIQRIERLPSSALRSQFRVGRGSDSFRPWAPTASYSSHMPQRYGSLR
NT seq
5919 nt
NT seq
+upstream
nt +downstream
nt
atggacgacccggagatgtacagactggaggaggagacgaggtaccttcagacagaggtg
cgtcgcctggaggacatgcttgcttcctcccgagctgagcgtgacactgtgtctgtccgg
tacaatgccctgtccgaccatgttgcggacgagtggcaggagtaccagaagagactcgag
tatttcaacgaggtgcaccgcaagcagaccacactcatagaccggctggccaacaaggtg
cgagagtacaggggaagatgccgtgaactggagatgcgctccacggagaccacccggctg
agggagaccactgagcgagacctagagaccctgaacatggccctgaacactgccgaggag
aggctcagggcgtctgaggctcagcacacctttgacctggagacagccctggtcaagctg
gaggatgagcagaccaggtgtgaggcgtatgagagccaggtgtccagcatgcaggagcag
gtggggcagctggagtcgacagtggccggcctgaaggaggagagggacaaggctcagact
gctctcaagcgcttgacagatgaagtcaaggctaaggaggagcagtgggcctccgagtca
cagcgcttcaacaactactacatctcgggccacaagagtctgctggacctgtggcgggag
attggatccgtcaagcgtaacttcacggaggtcaaacatctcacctcccgcgacttgacg
gagctgaagggggacctcgagcgctacgcccaccagctgaccaccgcctgcaccaccgcc
caggccaacatgagttacattcccacgggcgagcgggatgagtatgtggtggccaacccc
gccgacctgtggggccgcatccaggagtgcgagaaggcccagatgcgcaccgagtctgag
aaaagctcgctcaaggagaagatcaatgacctcaactcacgcatctcggagctcaacaac
agcctcaggaacaaggaccgcaccatccaagacctcaacaagaaactggacgaaggagtg
gcggaggcggagtaccaggagaccctgaaggagaaggtgcggaccctggaggcgtacatg
gtggagatcgcgcagactgtcatcaaggacgccgagcagactggcggggaggccgaggct
aaggcgccctctgccttcagaccccccaccttcccccgtgttggcaggatcgtgcgggac
acagagcagggcgtggcgccggacctcccccagagcacagtgtcagcagtgcgcacggca
ctctccaatagacaagtccagatacacgaactgcagctgaagctcaactcgtccaaggat
cagctgacgtcgctccgcaagcagtatgagagtgcagaggccagccagcgctccctggag
gccaccatctctgagctgcgggacgagctggaggccgttgtgcgccagagggaggaggtc
acccgggagaaggaccgactcacagaagacctcgatgcaatatctgctgagaagaacagc
ctggagaagacgaggcagtcactcaagactcagctggagagtgcccaggaggaggcgagt
cggaagagtcgccacatctcagagctggagaaggagaagacagcgctgggggaggagcgg
gcgtacctcaacacccggctggccaaggagaaggaggaagtccagaaacacacacacacc
atcagcgtcctcaactcagagcttgccagcgtccaccagcaggtaactgttctgtcggag
tcgctggggaaggtgagggcagctgaggagcggctggaccaggagaaggacgacctgcgt
gaccagatccgctctatggagaggcagcgggcagacctggaggccaagcttgcccactcc
ctgcgccaagagatggacatgagggaggcgctggagaaggttgaggcatacagcataaca
ctggggcaggacaagtcccagctggtggccaagatcacatcgctggagacagagcgggcg
gcattaagcacagagcgtgccgagctgcggtcagacatagagcggctgaaggatgacctg
gaggcgctgagtgaagagcgggcaagtcacgaggcatccatcaccgcacttaacgagaaa
attgtgctgctcaacgtggagaaggagaagattgagctggagctgacagacaccatctcg
gaacgcaatgagcttcacgggcagcttgcagcactggagcgcatcaagacatcactggag
ggggaggtgacagcactcaacaacaccatcatggagaagagcagactggtggaccaactc
aacagtgataaagagagtctcaccaaggagaatgctgagatggaggtgcggctgagtgga
gcggagaaagagctgagtgtcttgcgggatacattgtcaacactcaagacagagaagcag
agtttggagagctttgcctcgtccctggagaagaagtggtctgccagtgaggcacggcgc
acacagctggagaaggaggcccagcagctcacggcagacaaggagaagctacacacacag
atgaacaagctgcagcgagaactggagggtgagctggccaaggcccgggaggcgcgcact
gccctagagcgtcgcctggatgagaaggagacagagcacaagaaggctctcatggcactg
cgggaccaacatgaggagaccctggactcactcaggaaggagaagaacaacatcgtgaca
gagctggaggacaagctcaacatgtccatccactccatgaagatagagagggacgagctg
gagctgaagaaagaccaggaaatctcgtccctcaagcgcctcactgagaaactccagcga
gataaggatgactcaaccctgcgcttcgaggaggagaaacaccgctccatgatgctggcc
cagcaggagattgccagcctggaggagaaggtggccgggctgcagcgtgacctgtcatcc
tatgagtcacagttggagcagctgcggcgggatgggtccagcaaggcggaagcagggcgg
gcaagtgagggggcattgcacaacaagatcattcagctcaaggaggaactgcactccaac
agccaagcctttgaaaagcagctcaaggacgagaaggactcctacgagcgcaggatacga
gagctgcagctgcggctggacgatgcaaggcgggagggcgaagtggaggccaccaccatc
aagactgacctgcggctggcacgggaggatgtgtgccgcctgcaacaggacctggaggat
gccgaggagaagctgaaggatgcggaggagaagagagcatccctcaagaaggaaatcagt
cggctcaatgaggacatgagatcgtctgaggagcggcgatccacggagctgcagaccttc
atcaagaaagctgaccaggagaagaaggacctacagaagcgactcgatgacaaggagaac
aaacttagctcactggagatctccgaggccaaacatgcagacttgatcgcccgcatgacg
gctcagctgcgagaacttaatgcagtgaagcaagaagcacagagggagacatccgaactc
aagaagaagctgcagctcctggagacagagggactgagcaaatcacaagaactggagaac
ctacgcctgcgcctctcctccgaggaagaccgacacaatgagagccgcaaagaggccacc
aaactgcggaccaagttggcagagtatgagcgtgaccgagacaaccttcagacagagctt
gccttgctggagcggcgactcactgagctggaggaccatcacgctgccaaggagcacgag
ctggccaccagcttggaggagtcccgtgccaatgaacgcaagctgaatgatgagaagaaa
aaccttgagaactacctgaacaatgccaaccagcagatcagcaacctcaaggtgaagctg
tcccgtgaggaggggcacgtagaagcactggagcagcagctgggcacgctggacaacacc
cgggagcagctggagaagaagctgcagaacgtgtatgcctcactgcgtgctgtcacccgc
atgtaccaggacatctccccagcctctccttctctccgttccaggaagggcaccaagatt
ggtttcgagctgtctggtagccagacagacctgcaggcttcccttgagtctattgggtcg
cctgagaagatcaatgtggctgagatcgatcctgaatctgtgcgtcacgagctgagggca
ctgatgacccagatgaaccaagtggagctggagagggatgacgcagtggctcgtgtggcg
agtctggagcgtcaactttctgagctccaggaggtgcaccagaagtctgaggcgcggctg
agggatgtcactcgtaccctctcggagttggaggagaggaagcgatatgctgatgacaaa
cttaacaaggccgtctcacagtccagccaacaggaggactctctccgacacaaggagagt
gagatccgatccctgaatgaggagctgagcaacactcgccgcaaaatgtcagacctggag
caggagaggtctaccctcaatgaccgtgtgcagaaactgaagagtgctgtgagtcgcatt
gagatggagaatgctgacatcagggagaagctgcgagcctcagagcagcgtgaaaccctg
ctggatgactcaaagtctcggctggaggctgaacttagcgctgccaagaagaacaccagt
gaaaagcacatggagattgagaacctgcacgcctccaaggagagtttaaaccggtcagtg
cggaccctggaagaccagaattcctcacttcgcaacaaagtggaggacttgaagagcaag
ctagcatccacatccaagtccgagggtgaactaaaggacaaactgtcatccatgaaccgg
tcactcaaagaagccatgtcctcatctggcactatgcaggaagacctcagcaggtcccag
aacctgctgacacgcaacgaggcggagcggcggcagctggaggagcgagtggccgacctg
cagagcaccgtcagcgagctcaagcgtcagaaggaccaactgtctgagtccaagaacaag
gctcagcaggacctctccaatgcagagatcaggaatgctgagttggagatggccatgaag
tctctcaaagggaaccttggtgagcgatcctcaacggatgagcttctctcaaaggtgacc
cgtctggagcaagaaaaggcagaactccgcgcccaagtggctgatctagagagaaagttg
gccataagtgaggcggaaaaaaaggattatgaaaaagcagaacatagacttgagaaggac
aaatctgatctcaagaaaattctaaataagtatgagcatgagaggaaggaccaccgacgg
cctcagcctgacagccacacggggcggccagaccagccctacatggactcatcggtgagc
agcatgcgcatcgagaacatggaactgaggaggaagattgacgatctggagactcagaac
acagagatgcagcagaagcacttgaaggagacactggagatgagcagtgaccaccgacga
gagcggcagattgacagtgagaagatccgtcgcctcaccaaccagatggaggcgatccgt
caggagaaggagaggtgcgagctgaggatccactccctggaacaacagattgcccagtac
cgtgaccagatccgggaataccgcaacaggagttcagcagtggcagcaaatgtgcggcgc
atccgaacatccatgacagactccctgcacaccattggaacgcacccgagggtctccagc
ggcgtgctcgacacagagatccagcggattgagcggcttccctcctctgccttgcgtagt
cagttccgtgtgggtcgggggtcggacagcttccgtccttgggcccccacggcctcctac
tcctcacacatgcctcagcgttatggttccttacgctag
DBGET
integrated database retrieval system
