Scylla paramamosain (green mud crab): 135090540
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Entry
135090540 CDS
T11531
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1-like
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
sprm Scylla paramamosain (green mud crab)
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sprm03041
]
135090540
03110 Chaperones and folding catalysts [BR:
sprm03110
]
135090540
Enzymes [BR:
sprm01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
135090540
Spliceosome [BR:
sprm03041
]
Complex C
Other components
PPlases
135090540
Chaperones and folding catalysts [BR:
sprm03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
135090540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
EIF3I
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
TRM82_WD
CFAP251_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
Beta-prop_WDR75_1st
KNTC1_N
BRCT
WD40_Gbeta
Beta-prop_NWD2_C
VPS11_N
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
135090540
NCBI-ProteinID:
XP_063843433
LinkDB
All DBs
Position
35:complement(2088556..2096193)
Genome browser
AA seq
620 aa
AA seq
DB search
MSDAKRKHDEQEGEEGSEEEWIGPRPQEAAAEPRIKKIKVLEHEQMYLENLPCAEYYEKS
YMHRDTVTHVVVTKTDFIVTGSCDGHIKFWKKQEEGVEFVKHFRAHLGNVQQLAANHSGT
RLVSLSNDKSLKVFDVENFDMINMMKLDFIPSTGEWIHPASDPQHTLAVADSESPKIYIF
DGHGTNIPLHVLETIHTKPVTIIKYNHRFDVVLSVDEIGMIEYWAGSKKDFQTPTCVNFR
SKLDTDLFEFVKNKTMPRCMTISPDGLHFATIGDDKKVRVFKFLTGKMTRVFDESLQHYI
ELQQQKQQIPNMEFGRRLAVERDVEKGGALGVCNILYDESGYFLLYATMLGVKIVNLHNN
HLVRTIGKPENLRLLNLALFQGKVKKNKGPLTMEMEASENPALDSIKADPTLVATAFRKN
RFYLFTRRDATDTKSVDTDRDVFNEKPSKEDIIAATEQGGAQRLYETAVLHTSLGDITLK
LFPKECPKTVENFCVHVKNGYYNGHLFHRVIKQFMIQTGDPLGTGVGGESIWGTEFEDEF
HPSLRHDRPYTLSMANAGPNTNGSQFFITVIPTPWLDNKHTVFGRVIKGMEVVQNISNVK
TNPKTDKPYDDITIISVSVK
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgccaagaggaagcatgatgagcaagagggagaggagggcagtgaggaggag
tggatcgggccgaggcctcaggaagctgccgcggagcccaggatcaagaaaatcaaagtg
ctggagcatgaacagatgtacttggagaacctgccgtgtgctgagtattatgagaagagc
tacatgcaccgggacacagtgactcatgtggtggtgaccaagacagatttcattgtcact
ggaagctgtgatggccacatcaagttttggaagaagcaggaagagggagtagaatttgtg
aagcatttccgtgcccaccttggcaatgtgcagcagctggcggcgaaccactcaggcacc
aggctggtctctctctcaaatgacaagagtctgaaggtgtttgatgtggaaaattttgat
atgatcaacatgatgaagctggatttcattccctcgacaggggagtggatccatccagca
tcagacccacagcacacacttgccgtggcagattctgagagtcccaaaatttacatattt
gacggtcacggcaccaacatacccctgcatgtattggagaccatccacaccaagcctgtc
acaatcataaagtacaaccacagatttgacgttgttctctctgtggatgagatcggcatg
attgagtattgggctggatcaaagaaggacttccagacaccaacttgtgtcaacttcaga
tcaaaactggacactgatttgtttgagtttgtgaagaacaagacaatgccacggtgcatg
accatctcacccgacggactgcactttgccacaatcggtgatgacaagaaagtaagagtg
ttcaagttccttactggaaaaatgaccagagtgtttgatgaaagcttgcagcactacatt
gagctgcagcaacagaaacagcagattcctaacatggagtttggcaggcggttggccgtg
gagcgagatgtggagaagggaggagctctaggagtgtgcaacatcttgtatgatgagagt
ggctacttcctcctgtatgccaccatgcttggggtgaagattgtcaacctgcacaacaac
cacctggttcggacgattgggaagccagagaacttgcgcctgctgaaccttgcactcttc
cagggtaaagtgaagaagaacaaaggtcccctcaccatggagatggaggcttcagaaaat
cctgccctggattccatcaaggcagacccaacactggtggccacagccttccgaaagaac
cgcttctatctcttcacgagacgagacgccacagacaccaagagtgtggacactgatcgg
gatgtcttcaatgagaagccttccaaggaggacatcattgctgctacagaacaaggaggt
gctcagagattgtatgaaacagcagtgctccacacatcacttggggacatcacactgaag
ctcttccccaaggagtgtcccaagacagtagagaacttctgcgtgcatgtcaagaacggt
tactacaacggccacttgttccaccgtgtcataaaacagttcatgattcagacgggagat
ccactgggaactggtgttggtggggagagcatttggggaacagagtttgaggatgagttt
cacccctcccttcgtcatgaccgcccttacactctcagcatggcaaatgctggtccaaac
accaatggttctcagttcttcatcacagtcattcccacaccctggctggataacaagcac
acagtgttcggccgagtcatcaagggaatggaggtggtgcagaacatctcgaacgtcaag
accaaccctaagacagacaagccatacgatgacatcaccataatatcagtgtctgtgaaa
tga
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