Scylla paramamosain (green mud crab): 135091291
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Entry
135091291 CDS
T11531
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27 isoform X1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
sprm Scylla paramamosain (green mud crab)
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sprm03041
]
135091291
03009 Ribosome biogenesis [BR:
sprm03009
]
135091291
Enzymes [BR:
sprm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135091291
Spliceosome [BR:
sprm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135091291
Ribosome biogenesis [BR:
sprm03009
]
Eukaryotic type
Pre-60S particles
Helicases
135091291
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AGK_C
DUF6065
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
135091291
NCBI-ProteinID:
XP_063844855
LinkDB
All DBs
Position
37:complement(1464751..1472792)
Genome browser
AA seq
793 aa
AA seq
DB search
MVQQIEEDAGVFSPPPLITPGTLQPPSALDTGPGTIESGDEVDNYSGSGSDSEDEIEVRR
DAKESEFYKDFTFMASAGDYQRDTWDEVLKYLKPKRSINLSETIARVRLEEKEKRKKKKE
QESQKEGDGVEVKIEPGEGDSDLDSEEEEGEDEVENSDGEFMPDPDTKDVLRQREDEVKR
KERRKDRPVKIKKSLKELQQEENDARFFEDAPPCQADTTFLEMNFSRSLLKAIDSLGYDK
PTPIQAATIPVALQGRDVCGCAATGTGKTAAYMLPILERLLYKPRDDVVTRVLVVVPTRE
LGVQVFQVSKELSKYSHVEIALSVGGLDLTTQVAALKRIPDIVIATPGRLIDHTLNTPTF
SLDSIEILVLDEADRMLDESFEDQMKEIIQHCSANRQTLLFSATMTSQVKELAMVSLKNP
VKVFVNENTDVAQNLRQEFVRLRKHLEGQREAALAYLVSRSFRQNCMVFVETKAMAHHLT
ILLGLLGIKAGELHGNLKQTDRLLALKKFRDQEVDILIATDVAARGLDIKGVKTVINYTL
PSRYTRYVHRVGRTARAGHCGRSVSLAGEKEFPMLKEIKKCSRSAMFERILNKDVLAKYI
AKVQRLGPAVKKVMHEEQEEKQLAAMEQSIRSMEKRLQDPEKEEEDAKPQRTWFQSDDEI
KQKTKKRALKGKARAAVERAKRRQKARRDAEDPEEKRMRGEVGWAQRQAKRDGKLKRLTL
QDDIVAPVVDSRDGGGAGRKRKRGGPTSSFDQELTRTDRRSVKKFRAGPSYQERREAFEA
KNPGRKFNPKKKK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacagatagaggaggatgcaggggtattctcgccaccacccctcatcaccccc
gggacacttcagcctcccagtgcccttgacaccggccctggcactatagagtctggggat
gaggtggacaactactcaggctcaggatcggacagtgaagatgagatcgaggtgcggcga
gatgctaaggaatcggagttttacaaggacttcaccttcatggcgtcggccggggactac
cagagggacacatgggacgaggttctcaagtacctgaagcccaagcgtagcatcaacttg
agtgaaaccatcgcacgggtcaggctggaggagaaggagaagaggaagaagaagaaggag
caggagtcacagaaggagggcgatggggtggaggtgaagatcgagcccggggagggagac
tcggacttggactcggaggaggaggagggagaggacgaggttgagaactccgatggggaa
ttcatgcctgatccggacacgaaggatgtgctgcggcaacgggaggatgaggtgaagagg
aaggagaggcgcaaggaccggcctgtcaagatcaagaagtccctgaaggagttgcagcag
gaggagaatgatgccaggttcttcgaggacgcgccaccctgccaggctgacaccaccttc
ctggagatgaacttttcccgttccctcctcaaggccatcgacagcctagggtatgacaag
cccacccctattcaggccgccaccatccccgtagcccttcagggacgtgacgtgtgtggg
tgtgcagcgacagggacaggaaagacagccgcgtacatgctgccaatcttggagcgtcta
ttgtataaaccccgcgatgatgtggtgacgagggtgttggtggtggtgccaacgagagag
ctgggtgtgcaggtgttccaggtgtccaaggagctgtctaaatactcccatgttgagata
gccctgtcagttggtggcctggacctcaccacccaagttgccgccctcaagaggatcccg
gatattgtcatcgccactccaggtcgcctcattgaccacacgctcaacactcctaccttc
agtctggatagcattgagatcttggtgctggacgaggcggatcggatgctggacgagagt
tttgaggaccagatgaaggagattattcagcactgctctgccaacagacaaacactgctc
ttctccgccaccatgacttcccaggtgaaggagctcgcaatggtctccctcaagaaccca
gtcaaggtgtttgtcaacgagaacacagacgtggcacaaaacctacggcaggagtttgtt
cgcctgcggaagcacctggaggggcagcgcgaggcagccctggcgtaccttgtgtcccgc
tccttccgccagaactgcatggtgtttgtagagaccaaggcaatggcacaccacctcacc
attcttctggggctcctcggcatcaaggctggtgaactgcatgggaacctgaaacagacc
gaccgacttctggcgctcaagaagttccgggaccaagaggttgacatcctgatagcaact
gatgtggctgcccgcggtctggacatcaagggagtgaaaactgtcatcaactacaccctg
ccgtcgcgctacacccggtacgtccaccgggtggggcgcacagccagggcggggcactgt
ggccgctccgtgagtctggcaggggagaaggagttccccatgcttaaggagatcaagaag
tgttcccgcagcgccatgtttgaacgcatcctcaataaagacgtgctggccaaatacatt
gccaaggtgcagcgtctggggccagcagtgaagaaggtgatgcacgaggaacaggaggag
aaacagttggcagcgatggagcagagcattcgcagcatggagaagcgcctgcaagaccca
gagaaggaggaggaggacgccaagccacagcgcacatggttccaaagtgatgatgagatt
aagcagaagacaaagaaacgagcactgaagggcaaggcgagggcagcagtggagcgcgcc
aagaggaggcagaaggcaaggagggatgccgaagaccctgaggagaagcgtatgaggggg
gaggtggggtgggcacaacggcaagcgaagagggatggcaaactcaagcgcctcaccctg
caggacgacatagtggctccagtggtggactcaagggatggtggtggtgcaggaaggaag
cggaagaggggtggaccgacctcatcctttgaccaggagctcaccagaacagaccgtcgc
tctgtcaagaagttccgtgccggcccctcataccaggagcgccgggaggcatttgaggcc
aaaaacccgggccggaaattcaaccccaagaaaaagaaatag
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