Scylla paramamosain (green mud crab): 135092016
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Entry
135092016 CDS
T11531
Name
(RefSeq) tumor susceptibility gene 101 protein-like isoform X1
KO
K12183
ESCRT-I complex subunit TSG101
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03250
Viral life cycle - HIV-1
sprm03272
Virion - Hepatitis viruses
sprm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135092016
03272 Virion - Hepatitis viruses
135092016
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135092016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sprm04131
]
135092016
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sprm04147
]
135092016
Membrane trafficking [BR:
sprm04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
135092016
Exosome [BR:
sprm04147
]
Exosomal proteins
Proteins found in most exosomes
135092016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
FBF1
SPAM
BRE1
CCDC93_CC
Spc7
EMP24_GP25L
DUF724
ArlX
Macoilin
FUSC
Motif
Other DBs
NCBI-GeneID:
135092016
NCBI-ProteinID:
XP_063846199
LinkDB
All DBs
Position
39:complement(1399380..1412254)
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AA seq
439 aa
AA seq
DB search
MSLQAHEQVVSQAVANRYQNADKTKMDVMTALHNYRGLVPKLEKFVFNDGIERELLNLAG
TIPVRFKGSVYNIPVCIWVLDNHPFSPPMVYVKPTPDMLIKASRHVDQNGKVFLPYLHEW
NLNSSDLVGLIQIMIMVFNEMPPVYSKPKTHTTTASPYPTSFPGNMPGYMPMPGVGPNLP
YPAPQPPATSGYPSYPTQPPAYPPTSTPYPVYPPTSSGGGLPTMPQMATPYPPPYTAGMP
YSVYPPVTSNPSTQTSATETSSTTSATSTGTITEEHIRASLISAVSDRVRAKLRDSYGGC
QAEVSVLRQQQSDLNEGKTKLEGLLNKLDQEQTELDKNMRILREREAEMKSAIARLSSAT
EPLDLDEAVTTTAPLYKQLLNAYAEDQATQDAIYHLGEALRRDVIDLDCFLKHVRSLSRK
QFQLRATMIKCRAKGNMAG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccaggcccacgagcaggttgtctcgcaggcggtggccaacaggtaccagaat
gctgacaagaccaagatggacgtgatgacggcactgcacaactaccgtggccttgttccc
aagctggagaaatttgtttttaatgatggcatcgagcgagagttgttgaaccttgctggc
acgatcccagtgcgcttcaaaggatcggtgtacaacattcccgtgtgcatctgggtcctg
gacaaccaccccttctccccgcccatggtgtacgtcaagccaacgccagacatgctcatc
aaggcttcccggcacgtggaccagaacggcaaggtgttcctgccgtacctgcatgagtgg
aacctgaactcctcggacctggtgggcctcatacagatcatgatcatggtgtttaatgag
atgcctccggtgtactccaagcccaagactcacaccaccactgcctccccctaccccacc
tccttccctgggaacatgccaggatatatgccaatgccaggagtggggcctaaccttccc
tacccagccccacagccccctgctacctctggctacccctcctacccaacacagccccct
gcgtatcccccgaccagcaccccatacccagtgtacccccccacaagcagtggtggcggc
cttcctactatgccccagatggccacgccctacccgcccccatacactgctggcatgccc
tactcagtctacccacctgtcacttccaacccgtccacacagacatcagccacagagacc
agcagcaccacctcggcaactagcactgggaccatcaccgaggagcacatccgcgcctcc
ctcatctctgctgtgagtgaccgggtgagggccaagctccgggacagctacgggggctgc
caggcagaggtgtcggtcctgcggcagcaacagtcggatctgaacgagggcaaaaccaag
ctggagggactccttaataagctggatcaggagcagactgagcttgacaagaacatgagg
atcttgagggagcgagaggcagagatgaagtccgccatagctcgactctcatctgccacg
gaacccctggacttggacgaggcagtcaccaccacggcacccttgtataagcaactccta
aatgcctatgcggaggaccaggccacccaggacgccatctaccacctaggggaggccctg
cgcagagatgtcattgacctggactgtttcttgaagcacgtacgttccctctccaggaag
cagtttcagctccgagccacaatgattaagtgccgcgccaaggggaacatggcaggataa
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integrated database retrieval system
