Scylla paramamosain (green mud crab): 135092813
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Entry
135092813 CDS
T11531
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen2-like
KO
K15322
tRNA-splicing endonuclease subunit Sen2 [EC:
4.6.1.16
]
Organism
sprm Scylla paramamosain (green mud crab)
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sprm03016
]
135092813
Enzymes [BR:
sprm01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
135092813
Transfer RNA biogenesis [BR:
sprm03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
135092813
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
135092813
NCBI-ProteinID:
XP_063847577
LinkDB
All DBs
Position
41:complement(12897648..12900440)
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AA seq
503 aa
AA seq
DB search
MTTTAFTLPPPRRKARVKQVPGAPLPLPSALPHAPCTHYEATYCQGSITIRDPSQAEALW
QNGCFGHGAVMGGRGGPKGQKKWRLVEAEGLKSPKWFKETRTEQRGVEGGVEREVEENEM
EVDLSEEKEKEVEEEEEEDMKEEKRKGLEIMEVKENVDKEEKNEETEEVKVKEDKEEDEE
EEEKKEEENEMEEEEKGEENEMEEETQDMETKASVDTEKDDRLTPNKEEEEKEKDDETEK
THKDKTKTPNTGEHERLPTDQEKKKEDKENTPEPKEELGESEEEETNSDPELTEPWKTIL
VLSPDQKGYRGKHNRDTCLSLLPEEALFLSYALGCLVLTHEEVDESCKGRKRALDEPTSH
EMTIDEMWRVFSQQDASFPVKYAVYHHYRTLGWVVKAGLKYGVDYVLYPVGPAFYHSQYA
VRVYSVWADTLTLDTTVPGHTSSWTTTATTERLANHVNKTPIICFVVRPRALTQSRLGLI
DCLKELKVQEMMLTRWSPANGIV
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaactgccttcacactgccacccccaagaaggaaagcaagggttaaacaggta
cccggcgcgcccctgcccttgccatcagccttgccacacgccccctgcacccactacgag
gccacctactgccaagggagcatcacgattcgggaccccagccaggcagaggcgctgtgg
caaaatggttgttttggacacggagcagtgatgggtggaagaggaggaccaaaagggcag
aagaagtggaggctggtggaggcagaggggttgaagagccctaagtggttcaaggagact
aggacagagcagagaggagtggagggaggtgtggagagagaggtggaagagaatgagatg
gaggtggatttgagtgaagagaaagagaaggaggtggaggaggaggaggaggaggatatg
aaagaggagaagagaaagggattagaaattatggaagtgaaggaaaatgtagataaagaa
gagaaaaatgaagaaacagaggaagtaaaagtgaaagaagataaggaagaagatgaggag
gaggaggagaagaaagaagaagagaatgaaatggaggaggaggagaaaggagaagagaat
gaaatggaagaagaaacacaagatatggaaacaaaagcgagcgtagacacagaaaaagac
gacagattaacaccaaacaaagaggaggaggagaaagaaaaggacgatgaaacagaaaaa
acacacaaagataaaacaaagacaccaaacacaggagaacacgagagattgccgacagac
caagaaaagaagaaagaagacaaagaaaacacaccggaacccaaagaggaactaggagag
agcgaagaggaggaaacaaatagcgaccctgaacttacagagccatggaaaacaatattg
gtactatctcctgaccaaaaaggctacagaggcaaacataatagagacacctgcctctca
ctactcccagaagaggccctgttcctctcctatgccctcggatgcctcgttctcactcac
gaagaggtggatgagagttgtaagggccggaagagagcgctggacgaaccgacctcccat
gaaatgactatcgatgaaatgtggagggttttcagtcaacaagatgcaagtttcccagtg
aaatatgcagtttatcaccactaccgcacgctggggtgggtggtgaaggctggtttgaag
tatggggtggactatgtgctgtatccagtggggccagctttctaccattcccagtatgca
gtgagggtgtacagtgtgtgggctgacactctcactctcgacactactgtaccaggccac
acctcctcctggaccaccaccgccaccaccgaacgccttgccaaccatgtcaataagaca
cccataatatgcttcgtggtgcgtcccagggccctcacacagtctcgcttgggcttgatt
gactgcctgaaggaactgaaggtgcaggaaatgatgctgacaaggtggagcccggctaat
ggcattgtatga
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