KEGG   Scylla paramamosain (green mud crab): 135093718
Entry
135093718         CDS       T11531                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
sprm  Scylla paramamosain (green mud crab)
Pathway
sprm03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sprm00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    135093718
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sprm04121]
    135093718
   03036 Chromosome and associated proteins [BR:sprm03036]
    135093718
Enzymes [BR:sprm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     135093718
Ubiquitin system [BR:sprm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    135093718
Chromosome and associated proteins [BR:sprm03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     135093718
    Noncanonical PRC1 (PRC1.1)
     135093718
    Noncanonical PRC1 (PRC1.3/1.5)
     135093718
    Noncanonical PRC1 (PRC1.6)
     135093718
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-Nse zf-RING_5 zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_4 zf-rbx1 zf-RING_6 zf-UDP TRAF3_RING zf-C3HC4_5 SBP New_glue
Other DBs
NCBI-GeneID: 135093718
NCBI-ProteinID: XP_063849320
LinkDB
Position
43:12554965..12561931
AA seq 357 aa
MAATEQNAVNKTWELSLYELHRTPQEAITDNTEIAVSPRSLHSELMCPICLDMLKNTMTT
KECLHRFCQECIITALRSGNKECPTCRKKLVSKRSLRPDPNFDTLISKIYPSRDEYEQHQ
ERVIAKLNKNHNHASLITSIEEGIKLQIQSRQKNRKALQEDGATPTPSAPSTPTPTDPSA
TPAATPNATATTTAAATTTPQSTAASLGPKVKKPRRTSENESGPGSSNDGNPGEAEDGGP
VEAGEIELVFRPHPLEMNEDNELIRELKDSSIRYIKTTANATIDHLSKYLAMRLTLANRT
GELETELPSSLNNFCIYIAPTPDQYIGVVGSLTLEQINEKYWRVNKPMEMFYSWKKN
NT seq 1074 nt   +upstreamnt  +downstreamnt
atggccgccacagaacagaacgcagtgaacaagacgtgggagttgtcgctgtacgaactg
caccgcacaccacaggaggctatcacagacaacacagagatcgctgtgtcgccgcgctcc
ctccactctgagttgatgtgtcccatctgcctcgacatgctcaagaacaccatgaccact
aaggagtgtctgcacaggttctgccaggagtgcatcatcactgctctgcggtcagggaac
aaggagtgtccaacctgccggaagaagctggtgtccaaacgttcacttcggccggatcca
aattttgacacgctcatctcaaagatctacccgagccgtgacgagtatgagcaacaccag
gaacgtgtcattgccaagctaaacaagaaccacaaccatgcatccctcatcacatccatc
gaggaggggatcaagttgcagattcaaagccggcagaagaacaggaaggctttgcaggag
gacggagccacgccaacaccctccgccccctccacccccacccctaccgacccttctgcc
accccagctgccacgcccaatgccactgctaccacgactgctgcggccaccaccacacca
cagtccactgcagcaagtctcggtccaaaggtgaaaaagccgagacggacctccgagaat
gaatccggccccggttcaagcaatgacggcaacccaggtgaggcggaggatggtggacca
gtggaggcgggtgagattgagctggtgttccgcccccacccactggagatgaacgaggat
aatgagttgatacgagaattgaaagactcgtcaatccgctacatcaagaccacagccaat
gctactattgaccacctgtctaagtacctggcgatgaggttaacacttgccaacagaaca
ggagaacttgagacagagcttccttcatccctcaacaacttctgcatctacatcgccccc
acgcctgaccagtacatcggagtggttgggtccctcacactggagcagatcaacgagaag
tactggagagtcaacaagccaatggaaatgttttactcatggaagaaaaactga

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