Scylla paramamosain (green mud crab): 135095072
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Entry
135095072 CDS
T11531
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135095072
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sprm03009
]
135095072
Ribosome biogenesis [BR:
sprm03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
135095072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Nucleolin_bd
AAA_16
AAA_33
AAA_28
AAA_5
AAA_22
RuvB_N
AAA_18
RNA_helicase
nSTAND_NTPase5
nSTAND3
ABC_tran
TsaE
Mg_chelatase
ATPase
Rad17
AAA_14
TIP49
Zeta_toxin
IstB_IS21
Sigma54_activ_2
AAA_29
AAA_30
DUF815
AAA_17
NPHP3_N
SCAB-PH
NB-ARC
Parvo_NS1
T2SSE
ATP_bind_1
AAA_21
Motif
Other DBs
NCBI-GeneID:
135095072
NCBI-ProteinID:
XP_063851818
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All DBs
Position
47:181041..203649
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AA seq
863 aa
AA seq
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MAVDTPCAVRTVPEPAVLPILYRVQEVLADLLGKVRNKRSREWITHSKNTQQEGQALCGP
LCGREDTMKRPYFQERSLPARVEKFMSENKHVDLEDMTDHLINNYREFRGKNRKAFMKSV
EKAYEWQLYCQQLDQDSGEDIEDSDGGGPDILEITEPDTLPRQGKNTNVMLTKMYKSASA
NSSPRPKKKNDFFVLDTEGNSSFNGTRTPEASARKKRKKEKERDGDIEELIKRKKKKQLT
AEASSIMLADMAGIEALEEQICDLAGNLRWPGVLQPLIKSALVTGPSGSGKTTFGQALAG
TCEAPVVRVTATELVGGLSGESEERITEVFEQAASLSPCVLLLEKLDVVAPKDSSTTKGL
ERRISTQLSSCLANLKTKHKDKQVLVLGETSRPEKLDWDLRGSFDLEVFMAIPTEEARGK
ILKLLCEGCVVDSSLGGSFEEIAYRTPGYVAGDLKKLVEKAQSLAWKRKKVSLRDGTKGG
SLEDRVKDFLGHLGMICEAEEQKITVTVTMEDFMEALLHITPALKREGFPTVPDVTWQDI
GGLEDIKRELREKILEPIKFAKLHEELGLSRPNGVLMWGPPGCGKTLLAKAVANEAGVNL
LPVMGPELLNMYQGESERAVREVFYRARNVAPCVIFFDEFDSLCPVRSKGEQGGSKTTIV
NTLLTEMNGFAKREDVYVIAATNRPDILDPAVTRPGRFDTLLYVDVPDYEGRVSIFKART
KNGTCPALAPDVKLEEVSRLCDNFSGADCDQLVYLAGKELIREVIHATTSSSATSSPSQP
SDGSAERRLVARRHFSAALRKMKPSISAEEQRRYKKLYSKMEAGRVQGTLQGFPEDAPPL
ALPPPDDTQPMEVASDKDAAATS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagatacaccctgtgccgttaggacagtcccagaaccagccgtacttcccatt
ctctaccgcgtccaggaagtacttgcagacctgttggggaaggtaagaaacaagaggagc
agagagtggattacccatagcaagaacactcagcaggaaggccaggcattgtgtggcccg
ttgtgcggcagagaggacaccatgaagcggccttatttccaggagcgctcactgcccgcc
agggtggagaagttcatgagcgagaacaagcacgtggacctggaggacatgacagaccac
ctcatcaacaattaccgtgagttccggggcaagaacaggaaagcctttatgaagagtgtt
gagaaagcttatgagtggcagctgtattgccaacagctggaccaggacagtggcgaggac
atagaggacagcgatggaggtggcccagacatactggagataactgaacctgacacactg
cccaggcaggggaagaataccaatgtgatgctgaccaagatgtacaagtctgcctctgcc
aactcctcccccagacccaagaagaaaaatgacttctttgtgctggacactgagggcaac
tcctccttcaacggaaccaggacgccagaggcaagtgcaaggaagaagcgaaagaaggag
aaggagagggatggagacatagaggaactgataaagagaaagaagaagaagcagctcaca
gcagaggcatctagcatcatgttggccgacatggcaggcattgaggcgcttgaggagcaa
atctgtgacctggctggcaacttgcggtggccaggtgtgctgcagcccctcatcaagtcg
gccctcgtgacgggtccctctggcagcgggaagaccacatttggacaggccttggcaggg
acatgcgaggcaccggtagtgagagtgacggccacagagctggttggcgggttgtctggg
gagagtgaggagcgcatcacagaggtatttgagcaggcggcctcgctgtcaccttgcgtt
ctgctgttagagaagcttgatgttgtggcgcccaaggacagcagcaccaccaagggctta
gagagaagaatttccactcagctgtcctcctgtctggcaaacctcaaaaccaaacacaag
gacaagcaggtgctggtgctcggggaaacaagccgtccagagaagcttgactgggaccta
cggggaagctttgaccttgaggtgttcatggccatccccactgaggaggcacggggcaag
atactgaagctgctgtgtgagggctgcgttgtggacagcagtctgggcggcagctttgag
gagattgcttaccgcaccccaggctacgtggcaggtgacctcaagaagctggtggagaag
gcacagagtctggcatggaagaggaagaaagtgagtctacgtgacggcaccaagggaggt
tctctggaggatcgagtgaaggacttcctgggccatctgggcatgatatgtgaggctgag
gagcagaagatcactgtcactgtcaccatggaagacttcatggaggcactactgcacatc
actcccgccctgaagagagaaggctttcccactgtcccggacgtcacctggcaggacatt
ggcggcttggaggacatcaagcgagaactgagagaaaagatccttgaacctatcaagttt
gccaagctgcacgaggagcttggactgagccggcccaacggtgtgctgatgtggggacct
ccagggtgtggcaagactctgctggccaaggcggtggccaatgaggctggcgtgaacttg
ctgccagtcatggggccagagctgctcaacatgtaccaaggagagagtgagcgggcggtg
agggaagtgttctacagggccagaaacgttgctccgtgcgtcatcttctttgacgagttt
gattccctgtgtcctgtgagaagcaaaggagaacagggcgggagcaagaccaccatcgtg
aacaccctgctgacagagatgaatgggtttgctaagagagaggacgtgtatgtcattgca
gccaccaacaggcctgacatccttgacccagctgtgaccaggccagggaggtttgacact
cttctctatgtcgatgtcccagattatgaaggcagggtgtccatctttaaagccagaacg
aagaatggcacgtgtcctgccttggcccctgacgtcaagcttgaggaagtgtccaggctg
tgtgacaacttctctggtgctgactgtgaccagctggtgtacctggctggtaaggagctc
atcagggaggtcatccatgccaccacctcctcctcagccacctcaagccccagccagccc
tcagatggctcagcagagaggagactcgtggccagaagacacttttcagccgcactaagg
aagatgaagccatccatctcagctgaggaacaaagacgctacaagaagctgtacagtaag
atggaggccggccgggtgcaggggactcttcaaggtttcccagaggacgccccacccctt
gctctgcccccaccagatgatacacagcccatggaggtggccagtgacaaggatgctgct
gccactagttga
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