Scylla paramamosain (green mud crab): 135095132
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Entry
135095132 CDS
T11531
Name
(RefSeq) nuclear cap-binding protein subunit 2-like
KO
K12883
nuclear cap-binding protein subunit 2
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03013
Nucleocytoplasmic transport
sprm03015
mRNA surveillance pathway
sprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135095132
09122 Translation
03013 Nucleocytoplasmic transport
135095132
03015 mRNA surveillance pathway
135095132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sprm03019
]
135095132
03041 Spliceosome [BR:
sprm03041
]
135095132
Messenger RNA biogenesis [BR:
sprm03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
135095132
Spliceosome [BR:
sprm03041
]
Common components
Common spliceosomal components
Cap binding complex
135095132
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF3602
RRM_10
RRM_5
Motif
Other DBs
NCBI-GeneID:
135095132
NCBI-ProteinID:
XP_063851966
LinkDB
All DBs
Position
47:complement(5122144..5129150)
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AA seq
155 aa
AA seq
DB search
MSMMTPSIDLSSYRDQHFKGSRADQERMLHLSTTLYVGNLSFYTTEEQLYELFGRAGDVK
KIVMGLDKFKKTPCGFCFVEYFTRDDAEMCMRFINGTRLDDRIVRTDWDAGFVEGRQYGR
GKSGGQVRDEYRTDYDSGRGGYGKIVQQKMLPKLT
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgatgacacccagcattgatctcagctcctaccgcgaccagcacttcaagggg
tcacgggcggaccaggagcgcatgttacacctctccaccaccttgtacgtgggtaacctg
tccttctacaccacggaggagcagctgtacgagttgtttggccgtgctggtgatgtcaag
aagattgtcatgggccttgacaagtttaagaagacaccatgtgggttttgcttcgtcgag
tacttcaccagagatgacgcagagatgtgcatgcgcttcatcaacggaactcggctggac
gaccggattgtgaggacagattgggacgctggatttgtggagggacggcagtatggaagg
ggcaagagtggggggcaggtgagggatgagtacagaacagattacgacagtggccgagga
ggatacgggaagattgttcaacagaagatgctgcccaagctgacctag
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