Scylla paramamosain (green mud crab): 135097998
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Entry
135097998 CDS
T11531
Name
(RefSeq) transcription factor Sox-3-B-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
sprm Scylla paramamosain (green mud crab)
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sprm03000
]
135097998
Transcription factors [BR:
sprm03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135097998
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Phage_min_cap2
Motif
Other DBs
NCBI-GeneID:
135097998
NCBI-ProteinID:
XP_063856250
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Position
4:complement(768890..776750)
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AA seq
450 aa
AA seq
DB search
MYPTMMESMPVSYASTMGGMMGHYFSGSSAAMGVGQIPPTHHTNSHVQQPPPQQPAAQQE
SSHQHQQASHTPHAPAQSAPEALTASHPHLRESNLVTPISTPSPADSTASGCSPSGSSQK
KENGSKDDHIKRPMNAFMVWSRMQRRKIAQENPKMHNSEISKRLGAEWKTLTEAEKRPFI
DEAKRLRAQHMKDHPDYKYRPRRKPKTLKKDGYPYSIPYPAVSMDPLRGGFPSQLSPYYS
ASAAAANYGSITAAHMAAAAAAAAAAQQQLTTQVSQASPVAYGYDASKYSSYMSSSSGYP
MSMYGAAATDPKYGDTSKAAAAAAVGGYEAAKSYLDSSKYLSDKYGLEKPASYLDKLAQE
PKDAEMKSASPGAAAVNPGTMAGYSSAAGALSNYYSQAASTSAFQPSGALSQAVPSTMAG
LLQPSQVASYTNAQYPPVGADYRRPLSVIF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtaccccaccatgatggagtcaatgccagtgtcctacgccagcaccatggggggcatg
atgggccactacttctccgggagcagcgcagctatgggcgtgggccagatacccccgact
caccacaccaattctcatgttcaacagccgccgccccagcagcccgccgcgcagcaagag
agcagccaccagcaccagcaggctagccacacgccccacgcgcctgcgcagagcgcaccc
gaggctctgacagcaagtcacccccacctgcgggagtccaacttggtaacacctatctcc
acgccctcgcccgctgattccactgcctcaggttgctctcccagcggctcttcgcagaag
aaagaaaatggaagcaaggatgaccacatcaagaggcccatgaacgcctttatggtttgg
tccagaatgcagcgccgcaagatagcgcaagaaaatccaaaaatgcacaactcagaaatc
tccaaacgcctcggagctgaatggaagacattaacggaagctgaaaaacgtcccttcatc
gacgaagcaaaacggctccgggcgcagcacatgaaggaccacccagactacaagtaccgc
ccccgcaggaagcccaagacactgaagaaggacggttacccctacagcatcccttacccc
gccgtctccatggaccctcttcgcggaggattcccgtcccagttgtcaccatactactct
gccagtgccgctgctgctaactacggctccatcactgctgcacacatggctgccgctgcc
gccgccgctgcggctgcccaacaacagctgaccacccaagtgtctcaggcgagccccgtc
gcttatggttacgacgcctccaagtacagcagctacatgagcagttcctcaggttacccc
atgagcatgtacggagccgcagccactgatcccaaatacggtgatacaagcaaagccgct
gccgctgcagctgtgggagggtacgaggccgccaaatcatatctagacagcagtaaatac
ctgtcggataaatatggactggagaagcctgcctcgtatttggacaaactggctcaagaa
cccaaggatgctgagatgaagagcgcgtcccctggtgccgctgccgtcaacccgggcacc
atggccggctacagttcggcggccggggcgctcagcaactactacagccaggccgccagc
acgtccgccttccaaccgtcaggagcgctgagtcaggccgttccatccacaatggctggt
cttctacagccttcacaggtggcttcctacaccaacgcacagtatccacctgtaggagca
gactatcggaggccactgtctgtcatcttttag
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