Scylla paramamosain (green mud crab): 135099453
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Entry
135099453 CDS
T11531
Name
(RefSeq) nuclear pore complex protein Nup107-like
KO
K14301
nuclear pore complex protein Nup107
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135099453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sprm03019
]
135099453
03036 Chromosome and associated proteins [BR:
sprm03036
]
135099453
Messenger RNA biogenesis [BR:
sprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135099453
Chromosome and associated proteins [BR:
sprm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135099453
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
FliT
ChaB
DUF8809
Motif
Other DBs
NCBI-GeneID:
135099453
NCBI-ProteinID:
XP_063857901
LinkDB
All DBs
Position
4:complement(6667081..6697968)
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AA seq
908 aa
AA seq
DB search
MLGFKNSQLEDSLMRLDAALGSPGGGVMKTPRKTFTSKAARRDDSVLESRGEGQGTRLSA
VPHASHLSVSGLSSLDSPLGVVGDVTALAPVVPVDTTTTDMTSAALLAHDDPGVRATQVL
FSEFINIMVVHPSEAQVWEELEQYEQACAQQVESLGNLIHKAPRHHTNFTNTQRIFQQLL
HERNTWRLLGSLYTERLAEDDSKDSPMEEEPTTDLKVVTNFYDSNRTIREAQIVIDWLEN
IAFDNFKTCYDAVEYFGGTHIAWENTLKTLRNENSGVVQPLKGSRPLVKSLDPDSCLREN
RPLHDLDQEDEMRLLRNVLVSVRSGQVSLAQELCVRAGHHWRAASLEGWRLHHDPNPKDP
SQRQPITGNAYRDVWKAVAWRIASDERLPVHERAIYGALCGHLPAMLLACDKWEDTLWAY
TRTMVDQWVEEQLRAAATHLRSLHPLPKDYPEEKLTMKGVFEAVEQRMEIQKEQGKNLYY
LLQKYLILDNMESLLQEAHVWLNDGIAPHLLRCLTHVVLFLRKIGRIPQQLEPHCIDILE
ACVKEAIERGDVEQVAWYTSVLPQWLQVEWYARFLHNITDDHHRHHALQLASSVGLDTHA
ITSAVVTNIRLSSSGRDSDSDVVSETTAEDRVKISAIDWLLYDPQQRSEALRQANALMRT
FLVSRKIGATRVLFNKLPSDSVNIIIKEYEAETGKAEVPPHSENIVREYFCIRTFLDAQD
SFTDWFDHYHQKRPTAPKKPPQSAGFAQQVAYEQVEQQYKGEMERWKRTLNLITTTACDR
LYNVLLFPDGGWLVDTNLEEQEQDPAGTSAQDGSAEGQTETAEPNRSHHLSVLRSIYIPQ
VASLLQNILHATEKYKECLQLADLIASEQYQLYKAFGRCELQRFLLKLQETSRELLDQNC
DALGYPLN
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgttggggttcaagaactcacagctggaggactccctcatgaggctggatgctgcactg
ggctctcccggcggtggtgtcatgaagaccccacgcaagaccttcacttccaaggctgca
cgaagagatgattcagttctggaaagccgtggggaaggtcagggcacgagactatcagct
gtgccacacgcctcacacctcagtgtgtctggcctgagcagtctggacagtccccttggc
gtggtgggggatgtgacagctcttgcgcctgtggtgccagtagacaccaccaccacagac
atgaccagtgctgcccttctagcccacgatgacccaggagtcagagccacacaggttctg
ttctctgaattcatcaacatcatggtagttcacccctctgaggcacaggtgtgggaggag
ctggagcagtatgagcaggcttgtgcccagcaagtggagtctcttggaaacctcatccac
aaggcaccaagacaccacaccaacttcacaaacacacagaggatctttcaacaactgctg
catgagcgcaacacttggcgtctgcttggctctctttacactgagcgcctggcagaggac
gactccaaggactccccaatggaagaggagcccactactgacctcaaagtagtcaccaac
ttttatgactccaatcgcaccatcagagaagcacagattgttattgactggctggaaaac
attgcttttgacaatttcaagacatgctatgatgcagtggagtactttggaggcacacac
attgcttgggaaaacactctgaaaactctgaggaatgaaaatagtggtgttgtgcagccc
ctgaaaggttcccggcctcttgtcaaatccctggatcctgattcctgcctgcgagagaac
cggcccctgcatgaccttgatcaggaagatgagatgcgtttgttgcggaacgtgcttgtc
tccgtgcggtctgggcaggtatcactggcgcaggaactttgtgtgcgtgctggccaccac
tggcgagctgcttcactggaaggctggagactgcatcatgaccctaacccaaaggatccc
tctcagcgccagccaatcactggcaatgcatatagagatgtgtggaaagctgtagcgtgg
aggatagccagtgatgagcgtttgccggtgcatgagcgtgccatttatggggctctgtgt
ggtcacctaccggctatgctgctggcctgcgacaagtgggaggacacactgtgggcatac
acccgcaccatggtggatcaatgggtggaggagcagctcagggcagcagccacacacctg
cgcagcctccatcctctgcctaaggactatcctgaggaaaagctgactatgaaaggagtg
tttgaagcagtggaacagcgaatggaaattcaaaaggagcaaggaaagaatttgtactac
ctcctgcagaaatatctcatacttgataatatggagagcctgttgcaggaggctcatgtg
tggctcaatgatggcattgctccgcacctgctgcgctgcctcacccacgtagttctcttc
ctgcgcaagattggccgcatccctcagcagctggagcctcattgcattgacatcctggag
gcctgtgtcaaggaggccatcgaacggggagatgtggagcaggtggcttggtacacgtct
gtcctgcctcagtggctgcaggtggagtggtatgctcgcttccttcacaacattactgat
gaccaccaccgccaccatgccctgcagctagcatcctcagtgggactggacacccatgcc
atcacctcagccgtggtgacaaacattaggttgtcctccagtggccgtgattctgacagt
gatgtagtgtcagaaaccacagctgaggaccgagttaagatcagtgccatcgactggctg
ttgtatgacccccagcagcggtcggaggccctgcgtcaggccaatgctctcatgcgcact
ttcctcgtctcacgcaaaattggagccactcgggtgctgttcaacaagctccccagtgac
tctgtgaatatcatcataaaggagtatgaagcagagacaggcaaagcagaagtcccacca
cactctgaaaacattgtgagagaatacttctgcattcgtaccttcctggatgcacaagac
tccttcacagactggtttgaccactaccaccaaaagaggcccactgctcccaagaagcct
ccccagagtgcagggtttgcccagcaggtggcatatgaacaagtagagcagcagtacaaa
ggagagatggagcgctggaagcgaactcttaaccttatcaccacgactgcctgtgaccgg
ctatacaatgtgctgctcttccctgatggaggctggctggtggacacaaaccttgaggag
caggaacaggatccagcaggaaccagtgctcaggatggaagtgctgagggtcagacagaa
actgcagagcccaaccgttcccaccaccttagtgtactgcggtccatctacatcccccag
gttgcatctttgcttcaaaatattcttcatgccacagaaaaatacaaagaatgtctacag
ttagctgatttaattgcttcagaacagtaccagttgtataaggcatttggaaggtgtgaa
ctacagagatttttattgaaactacaagagacatccagagaactgctagaccaaaattgt
gatgcattgggctatcctctgaattaa
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