Scylla paramamosain (green mud crab): 135099712
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Entry
135099712 CDS
T11531
Name
(RefSeq) RNA-binding protein Musashi homolog 1-like
KO
K14411
RNA-binding protein Musashi
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135099712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sprm03019
]
135099712
Messenger RNA biogenesis [BR:
sprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135099712
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_11
Nup35_RRM_2
RRM_5
Motif
Other DBs
NCBI-GeneID:
135099712
NCBI-ProteinID:
XP_063858248
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All DBs
Position
4:9941072..9952847
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AA seq
411 aa
AA seq
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MSHVEASCTLQAVPALKHYTGINVYKSLRKHSPVPTSRNIDLVKGDHLKMEGVSTGDHMN
GSSGASQGGSSGRSSPSDPAPNKMFVGGLSWQTTPEKLREYFGSYGTVRDVLIMKDPVTQ
RSRGFGFITFGDASSVEKVISVPNHVLDGKKIDPKHATPKNKGKTNRTKKIFVGGVSQET
SAEEVKAYFSSFGKVEEAVMLMDNQTKRHRGFGFVTFECEDVVERVCDIHFHTIKNKKVE
CKKAQPKEAVQAASLLSKRLIVGQSGLASPIVTAQSAHIQAAAAAAAAAQAAALSGYGKL
MGGGTYPPLSAYRYTPYPLPSTALTSAGIPTGGAPHTTALPTGPTLSAVSAAPTIANQAA
ALSTSANHSIPTLSTHAGLTTPYQGYSLTNVDMSSFQGVDWNAMYGVGMYA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacgtggaggcctcctgcacactccaagcggtcccggccctcaaacactatacg
ggcatcaacgtgtacaagagcctacgcaagcattcaccagtacccacgtctaggaatatt
gatctggtcaaaggtgaccacctcaagatggaaggagtgtctaccggcgaccacatgaac
gggtcttcaggagcttcacagggcgggtcatcaggacgctcatctccctccgaccccgcc
cccaacaagatgtttgtcgggggcctttcatggcagacaacccctgagaaactgcgggag
tactttggttcctacggcactgtgcgggatgtgctcatcatgaaggaccctgtgacacag
cggagccgtggctttggcttcatcacatttggagatgccagcagtgtggagaaggtgatc
tctgtcccaaaccatgtgctggatggcaagaagattgatcccaagcatgccacccccaag
aacaagggtaaaaccaaccgcactaagaagatctttgttggaggggtgagccaggagacc
agtgctgaggaggtcaaggcttacttctcttcctttggcaaggtggaggaagccgtcatg
ctgatggacaaccagaccaagcgtcaccgtggctttggctttgtcacttttgaatgtgag
gacgtggtggagcgtgtctgtgacatccatttccacaccatcaagaacaagaaagtggaa
tgcaagaaggcccagcctaaggaggctgtccaggctgcctcactcctttcaaagaggtta
atagtaggccagagtggcctggccagccccatagtcactgctcagtcagcccatattcaa
gctgctgctgctgcagctgcagctgctcaggctgctgccttaagtggctatggcaagctg
atgggtgggggcacataccctccactgtctgcctaccgttacacaccttatcccctcccc
tccactgccctcacatcagctggcatccctacaggtggggctccccacaccactgccctt
cccacaggccccactctatctgcagtttctgctgctcccaccattgccaaccaggcagct
gccctgtccacctcagccaaccattctatccccacactgtccacccatgctgggcttacc
actccttaccagggatactccctcaccaatgtggacatgagctccttccagggagttgac
tggaatgccatgtatggggtgggcatgtatgcctag
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