Scylla paramamosain (green mud crab): 135100474
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Entry
135100474 CDS
T11531
Name
(RefSeq) homeobox protein SIX3-like
KO
K19473
homeobox protein SIX3/6
Organism
sprm Scylla paramamosain (green mud crab)
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sprm03000
]
135100474
Transcription factors [BR:
sprm03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
135100474
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
135100474
NCBI-ProteinID:
XP_063859486
LinkDB
All DBs
Position
5:complement(7317803..7385173)
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AA seq
457 aa
AA seq
DB search
MALMSGLGGLGSFGSFGAFSALNSLSVNAVGSGGLGGSSSPVVPTPLVPLPSLSFTAAQV
AAVCETLEESGDMERLGRFLWSLPVAHPHLQDLNKHEAVLRARALVSFHLGNFRELYAIL
ESQRFSKPSHARLQALWLEAHYQEAERLRGRPLGPVDKYRVRKKFPFPRTIWDGEQKTHC
FKERTRALLRESYLQDPYPNPSKKRELASATGLTPTQVGNWFKNRRQRDRAAAAKNRMQQ
FGATGIPATRREADTRSPLDDDDEDLINPGSPNTFEDDISEDEVSLDARSSSPAPTATSL
GLVPASSAPGPPCSLPLPLDTKPPTSPTAMTLLAPAKDSAKDQERDSPGLKEGPQEGKAV
LSEPPSSLPTSLQALAPALTIASLVSSHKRPASPPDHYVTPIRPIPERHSFGYPPLQPLT
KRPFTLTPMGPITDRHFLSSAGAFQPIRLQPKQKEDT
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcatgagtggacttggtggccttggatcttttggctccttcggagcgttctcg
gcattaaactccctgagtgttaatgcggtgggttcaggcggcctcggtggctccagcagc
cccgtggtgcccaccccgttagtgccgctgccctccctctcctttaccgccgcccaggtg
gccgccgtctgcgagactctggaggagagtggagacatggagcgtctaggcagattcttg
tggtcgctgccggtggctcacccacacctacaggacctcaataaacacgaggctgtgctt
cgagcccgcgctctcgtctccttccatttgggtaacttccgcgagctgtatgccatcctg
gaatcgcaaaggttttccaagccgtcgcacgcgcggctacaggcgctgtggctggaggcg
cactaccaggaggcggagcggctccgcggccggccgctgggacctgtcgacaagtacaga
gttcgtaagaagttccctttcccgaggacaatctgggacggggagcagaagactcactgc
ttcaaggagcgaaccagggcccttcttagagaatcctacctgcaggacccgtaccccaac
cccagcaagaagagagagctggcctccgccaccggtctcaccccaacacaggtcggcaac
tggttcaagaaccgtcgtcagcgagacagagcggccgccgccaagaacaggatgcagcag
ttcggcgccaccggcatccccgccacccgccgagaggctgacactcggtcgcctcttgac
gacgacgacgaggaccttatcaacccaggctctccgaacaccttcgaggacgacatctct
gaggacgaggtttctctggacgcccgctcctcgtcgcctgctccaactgccacgtcgctt
ggcctcgtccctgcttccagcgccccggggccgccgtgcagcctacccctgcccctggac
accaaacctccaacctctcctacagctatgacactcctcgctccggccaaggactccgcc
aaagatcaggagcgggactcgccaggactgaaggagggtcctcaggagggcaaggcggtg
ctgtcagagcctccctcgagtctgccaacctccctgcaggcgctggctcccgccctcacc
atcgcttccctcgtatcctcccacaagcggcccgcctcgccccctgaccactacgtgacc
cccatcagacccatcccggagagacacagcttcggctacccgccccttcagcccctgacc
aagcggcctttcaccctcacgcctatgggaccaattacagaccgccacttcctctcctca
gccggagcctttcagccaatcaggttgcagccaaagcagaaggaggacacgtaa
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