Scylla paramamosain (green mud crab): 135101453
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Entry
135101453 CDS
T11531
Name
(RefSeq) LOW QUALITY PROTEIN: DEAD-box helicase Dbp80-like
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03013
Nucleocytoplasmic transport
sprm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135101453
03015 mRNA surveillance pathway
135101453
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sprm03019
]
135101453
Enzymes [BR:
sprm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135101453
Messenger RNA biogenesis [BR:
sprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
135101453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
135101453
NCBI-ProteinID:
XP_063861498
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All DBs
Position
6:23896207..23919406
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AA seq
485 aa
AA seq
DB search
MGDDWAKAAEDQETKDRDLVDKVVEKVDDLKLQKNEEKEESKDENKPDPAAADDSEENVT
PGELSMLRKVMRKGIIQTKNKVEVLRADPKNPLHSVKSFEALDLRKELLKGIYEMGFRLP
SKIQEISLPTLLAEPAMNMIAQSQSGTGKTAAFSLAMLSRIDPSKKCTQGLILSPTMELA
LQTVECVKMMGKYCTDITIRSAVKGDMVPRGQKVTEHIVIGTPGKVVDWAVKYRCLDLRT
CKVFVLDEADVMIATQGHQDQSVRIHKQLPETCQMMLFSATYDDEVVNFAHAIIKNPVTL
RLKREEETLENIRQMYVECNSEEEKYRAISNIFSIPVGSAMFFCHTKANAVWLANRLKED
GNQVALLTGDLTPDERVQVLLRFREGAERVLICTNVLARGIDVDSVNLVVNYDLPRLHGT
SKADCETYLHRIGRTGRFGKTGNAINIVDGKEDLRLLREIEDHFNIKIIKLDYSNIDEID
KLGED
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgactgggccaaggctgccgaggaccaggaaaccaaggaccgtgacctggtg
gacaaggtggtcgaaaaggttgatgatttgaaactacaaaaaaatgaagaaaaagaagaa
tcaaaggatgaaaataaacctgatcctgcagcagcagatgattctgaagaaaatgttact
ccaggagaactgtccatgttgaggaaggtgatgagaaaaggcatcattcagactaaaaac
aaagtagaagtattgcgagcagacccaaagaatcctctacacagcgtcaagagttttgaa
gccttggacctacgtaaggaactcctgaaaggaatttatgaaatgggattcagactcccc
tctaagattcaagaaatatcacttcctacattgttggctgaaccagccatgaatatgata
gcacaatcacagtcaggaacaggcaagacagcagccttcagtttggcaatgttaagtcgc
attgacccaagcaaaaaatgtacccagggtcttattctgtcccctaccatggaactggct
ttgcaaacagtggaatgtgttaagatgatgggcaaatactgtacagacattaccatccgg
tctgctgtgaagggagacatggttcctcgtggacagaaggttacagagcatattgtcata
ggaacaccaggcaaagtggtggactgggctgtcaaataccgatgtcttgacctacgaacc
tgcaaagtatttgttttggatgaagctgatgtaatgattgctactcagggtcatcaagat
cagtcagtgagaattcacaagcagctaccagaaacttgccagatgatgctattctcagcc
acatatgatgatgaggtagtaaactttgctcatgccatcatcaagaatcccgtcactctc
cgcctcaagagggaagaggagactctagaaaacataagacagatgtatgtagaatgcaac
agtgaagaagagaaatatagagccatcagcaatattttctccatcccagtcggaagtgca
atgttcttttgtcacacaaaagccaatgctgtttggctagcaaacaggttaaaagaagat
ggcaatcaagttgcattgttaacaggtgatcttactcctgatgaaagagtccaagtactt
cttcgttttcgagaaggagcagaaagggttttaatttgtaccaatgttctggctcggggc
attgatgtggattcagttaatcttgtggtgaattatgatctgcccagactgcatggcact
agcaaggcagattgtgaaacttaccttcaccgcattggtcgtactggtcgctttggcaag
actggcaatgctattaacattgttgatggcaaagaagatctgcgattgctaagggagatt
gaagatcattttaatatcaaaataattaaattggactacagtaacattgatgagattgac
aaacttggggaagactaa
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