Scylla paramamosain (green mud crab): 135101564
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Entry
135101564 CDS
T11531
Name
(RefSeq) poly(A) polymerase beta-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135101564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sprm03019
]
135101564
Enzymes [BR:
sprm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
135101564
Messenger RNA biogenesis [BR:
sprm03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
135101564
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
135101564
NCBI-ProteinID:
XP_063861744
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Position
6:28170439..28246903
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AA seq
911 aa
AA seq
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MSITWNVTKKELMVLLSHARFRSMDASRTLGMTSAISLAKPKASDLEHTRELSEYLKEAG
MFEEDSELNHRFEVLGKLNTLVRTWIRDISINVKNMPPQIADTVGGKICTFGSYRLGVAG
KGADIDALCVAPRHIERTDYFSSFYELLKEQPEVTEMRSVEEAYVPVIKMKYEGIEIDLL
FARLALKEVPDSVDLKDDTILKNLDEKCVRSLNGCRVTDEILRQVPNRESFRLALRAVKL
WAKRHGVYSNVLGYLGGVSWAMLVARTCQLYPNATASTLVEKFFLVFSKWTWPAPVYLKQ
PYDAKLGFKVWDPRVNVQDRFHLMPIITPAYPQQNSTFNTSQSTRAVMVEEFKSGLQITE
DIMLGKATWDKLFQPPNFFMKYRHYLVVIAVARTPEDHLEWYGLVESKIRHLILSLEHNT
AIKTVHINPATFSCRVEEYLGKPHSSWFLGVDFNKSENVNIDLTNDINIFVEVVYKQSTY
NKAYKDGMEVNCKYVKRKQLTNYLSLEDLEKYKPKAENQPRHIGQKRKSDPIAPDSPSRE
SPEPTKKPKIDSDLPQASLNGDDSNTSIDEAYSNSSLPGLTPEINATQMTCQDSASPAHS
PNTLVPEMLPYLHQHPALPHHLYFLQSDSISHLPPSYHDQSTFQHDQHVNSPESQYHRQD
FHNHQLQHFHQNSKNALLFEVQCCPTFSTSQSHSPNNVMSNVQMVRMPLDSSPLNLALQE
NNNFPTPVIQFQTFHLPQFPQKMSNPPPPVAFSMPYPSSQQSSHGRSSSTPPSYGTTSIP
PASSFLSPCSNFHSPTPSSVAPHQNRIPFQQLRPSHPSSSHTNSNAASSLFSQNINHQPR
HHQHHHSASQPQRQSQQSFSTTRLSFSRRVVKPSQLDLARQRLSSVELPDVLTPEPPQLA
PSSGSFAIHFK
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgagcataacttggaatgtgaccaaaaaagagctgatggttcttctttcccatgcaaga
ttcaggagtatggatgccagcagaactttaggcatgacatcggccatcagcttggctaag
ccaaaagcctctgacctggagcacaccagggagctgtctgaataccttaaggaggctggc
atgtttgaggaagattctgagctcaatcacaggtttgaggtgctgggaaagctgaatacg
ttagtaagaacttggattcgagatatcagcataaatgtcaagaacatgccaccacagatt
gccgacactgttgggggtaaaatctgcacttttggttcctaccgtttgggagtggctggc
aaaggtgctgacattgatgccttgtgtgtggctccaagacatattgagcgcacagactat
ttctctagcttctatgaacttctcaaagaacagccagaagtcacagaaatgaggtctgtg
gaagaagcgtacgttcctgtcatcaaaatgaaatatgaaggcattgaaattgatcttttg
tttgcccggttagctcttaaggaagttccagactctgttgaccttaaagatgacacaatt
ctcaagaacttggatgaaaagtgtgtacgcagtcttaatggttgccgagtaactgatgaa
attcttcggcaagttcccaacagagaaagctttcgcttggctctcagggctgttaagctg
tgggcaaaacgtcatggtgtatacagcaatgttctgggttatcttggaggtgtatcatgg
gccatgctggtggctagaacctgtcaactttacccaaatgctacagcttccactttagtt
gaaaaattttttcttgtcttctctaagtggacttggccagcaccagtatatctgaagcaa
ccatatgatgcaaaactcgggtttaaggtttgggatccgcgggtaaatgttcaagacagg
tttcacttgatgccaatcatcacaccagcatatccccagcaaaattccaccttcaatact
tcacagtccactcgagcagtgatggtagaggaattcaaatcaggcttacaaattacggag
gacatcatgctggggaaagccacatgggacaaactcttccaacctccaaatttcttcatg
aaatacagacattacttggtggtgattgctgtagctcgcacaccagaagaccaccttgag
tggtatggtctagttgagtccaaaattaggcacttgatcttaagcctggagcacaacaca
gcaataaagacagttcacatcaaccctgcaacttttagctgtcgggtggaagaatacttg
ggaaaaccccattcttcttggttcttgggagtagattttaacaaatcagaaaatgtgaac
attgacttaaccaatgatataaatatttttgtcgaagtagtgtacaaacagagcacctac
aacaaggcttacaaggatggaatggaagtaaattgcaaatacgtcaagcggaaacagcta
acaaactacctatctttggaagacctagaaaaatataaacctaaggcagagaatcagcca
cgtcacataggacagaagaggaaatcagatcccatagcaccagactccccaagcagagag
agtccagagcctacaaagaaacctaaaattgactctgatctacctcaggcgagtttgaat
ggcgatgactccaacacctccatagatgaggcatattccaattcatccttacctggacta
actccggaaataaatgctacccagatgacctgccaagactccgcttccccagcacactct
ccaaacacattagttcctgagatgttgccttatctacaccagcatcctgctctgccacat
cacctgtattttctccaaagtgattccatctctcatttacctccatcataccatgatcag
tcaacttttcagcatgatcagcatgttaattcccctgaatctcagtatcatagacaagat
tttcataatcatcagttgcaacattttcatcaaaattcaaagaatgctttattgtttgaa
gttcagtgttgtccaacattttccacatcccagagtcactccccaaataatgtgatgagc
aatgtccaaatggtcagaatgcctctagattcttctccattaaatttagcacttcaggaa
aataataattttcctactcctgtcattcaatttcagacattccacctgcctcagtttcct
caaaagatgtcaaatcctcctcctcctgtagctttctctatgccataccctagtagtcaa
caaagttcacatggtagatcgagttccactccaccatcctatggaaccacaagtatccca
cctgcttcatcatttttgagcccctgctctaattttcacagcccaactccatcttctgtt
gctccacatcaaaacagaatcccttttcaacaacttagaccatcccatccatccagttca
cataccaattccaatgcagcttcttcactatttagtcaaaacattaaccaccaaccccgc
caccaccaacaccaccacagtgcaagccaacctcaaagacaaagccaacaaagcttcagc
accacccgcttatcattttcaaggcgagtggtgaagccatctcaactggatttggcaagg
cagcggctatcaagtgttgaacttcctgatgtcctcactcctgagccacctcagctggcc
ccttcatctggcagttttgcaatacacttcaagtag
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