Scylla paramamosain (green mud crab): 135101969
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Entry
135101969 CDS
T11531
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135101969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sprm03041
]
135101969
Enzymes [BR:
sprm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135101969
Spliceosome [BR:
sprm03041
]
Complex A
U2 snRNP components
U2 related factors
135101969
Complex B
135101969
BRITE hierarchy
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135101969
NCBI-ProteinID:
XP_063862556
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Position
7:complement(7461956..7485914)
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AA seq
1108 aa
AA seq
DB search
MGVLRRDSNTGLAAMVTGSRKGRRRSRSRSRSPDRRRSRDRDRDRGRSRRSRSRDRDRDR
HRSRSRDRRRSRSRDRRSRSRSRDRDRDRDRKRSRSRSRDRDRDRKRSRSRSRDRDRKRN
KRSRTHSPPKIKLLVDPPKPQEPVPVEPKEEEEVPLDFDPSKVDKEETEKRLEAEMQKRR
ERIEKWRAEKKKRELEAAKKEAEKGTLGATVPKVSLKAWSLEDDEEEEEGENKEGNGNVE
EEDEVDPLDAFMSGIQEEVRKINRVDIRGGVKKGTKITAGPAEPGAVKKPVIIMGVAKKA
NAKKKGELMEQNQDALEYSSEEEGEDLKDTMASINSKGKKELGKVDHTVIEYVPFRKDFY
VEVPEIANMTKEEVDNYRAELEGIRVKGQGCPKPIKTWAQCGVSKRILDVLKKNNYEKPT
PIQVQAIPAIMKGRDVIGIAKTGSGKTLAFLLPMFRHVVDQPPLEDTDGPIAVIMTPTRE
LCMQIGKECKKFAKNNLRVCCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANGGRV
TNLRRVTYVVLDEADRMFDLGFEPQVMRIIDNIQPSRQTVMFSATFPRQVEALAKKILTK
PIEITVGGRSVVCKDVTQEVVILDEDQKFLKLLEVLGQFYERGQTLVFVDKQENADSLFR
DLLSHSYRALVLHGGVDQIDRDSTILDFKAGRVPILVATSVAARGLDVKQLILVVNFDAP
NHYEDYVHRCGRTGRAGNKGWAYTFLTPDQPRYAAEIVRALEISENPIPPDLQKLYDEYK
QKLEGEGKKIKTGGGFHGKGFKFDESEANFASEKKKFEKAALGLADSDDEDIEHDIDQQI
ESMLNTKRTVKEIKGMANSSRRENNEGGLLLQQQVLSALHPLIWPLQLNPMLLFPTPACA
YPAPEVSSSSDGLAGMPFGGPSASDKLELARKLAQRINLQHNIGKEAKGASQQAAEFILK
GGAAMQPTISAKTVAEQMAQKLNNKLNYQPRDDQEEEEETTEETHHKYEEELEINDFPQQ
ARWRVTSKEALAQISEYSEAGITVRGTFCPAGKNPPEGERKLFLAIESTSELAVSKAKAE
IIRLIREELVKLRTSAGPAKAQGRYKVL
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgttgagaagggacagcaacacaggtctggctgctatggttactggaagcaga
aaaggacgcaggcggtcccggtcccgctccaggagcccagaccggcgacgctccagagac
agagatcgtgatcgtggcaggtcacgacggtctcgatccagagaccgtgatcgtgaccgt
cacagatcacgcagtagagaccgaaggagatcaagatctcgtgacaggcggtctaggtca
aggtcacgggacagagatcgagacagggacaggaagaggagcaggagcaggtccagggac
agggacagagacagaaagaggagcagaagcagatccagggacagggacaggaagaggaat
aagaggagccgcactcattcgcctcccaagatcaaactccttgttgaccctccaaagccc
caagaaccagtgcctgtagagcccaaggaagaagaggaagtgcccttggattttgatcca
tcaaaagtagataaggaagagacagagaaacgtcttgaagctgaaatgcagaagagacgg
gagcgcattgagaagtggagagcagaaaagaagaaaagagagctagaggctgccaaaaag
gaggctgagaagggaaccttgggtgctactgttccgaaagtgtccctgaaagcatggagc
cttgaggatgatgaagaggaagaggagggtgaaaataaagaaggaaatggaaatgttgag
gaggaagatgaagttgatccacttgatgcattcatgtctggtatccaagaagaggttcgc
aagatcaatcgtgtggacatacggggaggagtcaagaaaggcacaaaaatcactgctgga
ccagcagagcctggggctgtgaagaaacctgtcatcatcatgggtgtggcaaagaaggca
aatgccaaaaagaaaggagaattgatggagcagaaccaggatgctcttgagtattcatct
gaggaggagggagaggacctgaaggacaccatggctagcattaattccaagggcaagaag
gagcttggtaaagtggatcacacagtcattgagtatgtaccattcaggaaggatttctat
gtggaggtgcctgagattgccaacatgactaaggaggaagtggataactatagagctgag
ctggagggaattagggttaaaggtcaaggatgccctaaacccatcaagacttgggctcag
tgtggagtcagcaaaagaatattggatgttctcaaaaagaacaattatgagaagccaaca
cccatccaagtgcaggctattcctgccatcatgaagggcagagatgttataggcatcgct
aagacaggttctggaaagaccttagctttcttgctgccaatgttccggcacgttgtagac
cagccacccctggaagacacggatggacccattgctgttatcatgactcctacaagggaa
ctgtgcatgcagattggtaaagaatgcaagaagtttgcaaagaacaacttgagggtgtgc
tgtgtgtatggtggtacaggaatatctgaacaaatagctgagctaaagcgaggtgctgag
atcattgtgtgcaccccaggacgaatgatagacatgttggcagccaatggaggaagggta
accaacctacggagagttacctatgttgtgctggatgaggccgaccgcatgtttgacttg
ggctttgaacctcaggttatgaggataattgacaatatccagccatctcgccaaactgta
atgttctcagcaacattcccaaggcaggtagaagctctggcgaagaaaattttgacgaaa
ccgattgagataacggttggtgggcggtcagtggtgtgcaaggatgtgacacaggaggtg
gtaattcttgacgaagaccagaagttcctgaagctgttggaggtccttggccaattttat
gagagaggacagactcttgtatttgttgacaagcaagagaatgcggattctctgtttagg
gatctgttaagccactcttaccgggcgctggttcttcatgggggtgtggaccagatagac
cgtgacagtaccatcctggacttcaaggctggtcgagtgcccatactggtagctacgtca
gtagcagctcgaggtctcgatgtgaagcagttgattttagttgtcaactttgatgctccc
aatcactatgaggactatgtgcatcggtgtggacgtacaggtcgtgcaggcaacaaaggc
tgggcttacaccttcctaaccccagaccagccccgctatgctgctgaaattgtccgagct
ttggagatttctgaaaatcccattccaccagacttgcagaaactttatgatgaatataaa
caaaagttggaaggagaaggcaagaagattaaaactggtggtggtttccatggtaaaggt
tttaaatttgatgaatctgaagctaattttgcatcagaaaagaagaaatttgagaaggct
gctcttggtttggctgactctgatgatgaagacattgaacatgacattgatcaacagatt
gaaagcatgttgaacacgaagaggacagtcaaagaaatcaagggaatggctaactcctct
agaagggaaaacaatgaaggagggctcctgcttcagcaacaagttctttcagccttacac
ccactaatatggccacttcagctcaaccccatgttgctgttccccacaccagcatgtgcc
taccccgcaccagaggtgtcttcatcctctgatggtttagctggcatgccatttggtggt
ccctctgcttctgataagttagaattagcacgcaaactggcacaacgcatcaaccttcag
cacaacattggcaaggaggctaagggtgccagtcagcaggcagcagagtttattcttaag
ggtggtgcagccatgcaacccactatatctgccaagacagtagcagagcagatggcacag
aaattaaacaacaagctgaattaccagccacgtgatgaccaggaggaggaagaagaaacc
acagaggaaactcaccataagtatgaagaagaacttgaaattaatgatttcccacaacag
gccaggtggcgagttaccagcaaagaagcactggcacagatttctgaatattcagaagct
gggattactgtcagaggaacgttttgccccgcaggcaagaatccaccagaaggtgaacgc
aagctgttcttggctattgaatctacatctgaattagcagtatccaaagccaaagctgag
atcatccggctgatacgggaagaacttgttaagctacgaaccagtgctggacctgccaag
gctcagggccggtataaggttctttaa
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