Scylla paramamosain (green mud crab): 135104542
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Entry
135104542 CDS
T11531
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup155-like
KO
K14312
nuclear pore complex protein Nup155
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135104542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sprm03019
]
135104542
Messenger RNA biogenesis [BR:
sprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135104542
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Circovir_ORF3
TrbL_4
Motif
Other DBs
NCBI-GeneID:
135104542
NCBI-ProteinID:
XP_063868186
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All DBs
Position
10:complement(25867642..25889329)
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AA seq
1329 aa
AA seq
DB search
MQQNTLSSTLNLGTGDGGGGGGGGGEMQDLEVACGLIDKHLSYDSSFPSLLERLRVAPQG
FPTVSGLSESDYPSSGEVRSARHHHTTRKVPLPSELMYHFQHMKCNCMMGLFPEIHRAWL
TIDSDIYVWMYEDGSDLAYFDGLHETILSVGLVKPKAGVFKPYIEHLLVLTTTSEIVLLG
VSFSQPSEAEVSSGMHLLPEPLFSLPTDGSYVLTIQGTQDGRIFLGAKDGCLYELVYQAV
EGWFSRKCQKVNHTRSAISYLLPFLAFSEDDPINQVEVDDSRHILYTLSDRGTVTVYYLG
ADGKSTSRVVSVPHNNIMNAALQVAKTVDKTNFKSVVSLCPIGTSESPHIHLVVVTGTGV
RLYYTTGQLNGNPSQAPYQLTLLHVRLPPGFAANATVYRPTKVHKALYSHGMCILCSNES
NEADTVWTMSSDQYPYHHILAESQSTLAVDGYVWALADVTPKLWCAALNPPTSQGTLPPL
LVTQHQHAPRQLVLLSANGAHILIFQRPVDKLRYLLEEASGVEASIVKDFFTDMTPTQAC
TTALILATDPNIQNTQAAEWATRALFLYGASIDPPAPTSFPPQSPVNYSFNPPQMSTPLP
GQNISSTVPQDTQFSPLHNALYLYLARILRPAWSTPVAKRIEVEGKPVVVSCMTGEEVGF
LAYQVELLSKFLVTNQGGTTNPLQPLNISNTTLNRTLGDGSERASLLALKLLLDQAREVL
RLVSELTTHNFTAIVGWSAEGGCLMNLFLQEVRAQLRTVTLRDLVLTGRDICRSLIMALL
DRYHGDNASSDAISERLRDICPNLYRIEDAKLAKANEIILSSKANPNKIEKEKGFKEAVA
VSRYLTCGKQIGHHVNITGICSQLVSGGAYESVVDLCLSVASQRDPTGRALHYYKNNEPA
EDHQGYMAFTARMECYRVLMDQLNQLVGTGAAPTSLPKCSNTARSTYTTTPDPPFHRCHT
VCPSVNIRSITMINLIVASTDELAHVTLYQWLVDTSRTDRLLSLSSPYLETFLTRSNGQA
PLHHLLWRYYEKNKEFYKAAKTLLLLAEQRGDTSVGVRVDYLSRAHMCLSSCEMNTASNY
ADFMLHLEEKKEVAKVQLMVLDSLQCEAAGADVFAELNSSLLALTVLYEKFAEPWGLWDC
KLAILHCAGHSEPQLVQSIWTKLIDNELEKAAPVGVELKVDRLSSKLKSLARVYSSNPSY
FPLEHIIKHCEIRSVQLQADTSWVVTTLQGCGIPVSKLINIYHKLYRSGESVWEVEHSPH
HLLMVLAHLINMLIDTCASLQPQQKRALREQCLDYVAEYLTNLSASADTSAGIIMAHLKS
CQARLERLV
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagaacacactgagttccaccctcaatcttggtactggagatggtggtggtggt
ggtggcggtgggggtgagatgcaggacctggaggtagcatgtggtcttattgacaaacac
ctcagctatgactccagctttccttcgctccttgaacgcctcagagttgctccacaaggc
tttccaactgttagtggcttgagtgaaagtgactaccccagcagcggtgaggtgcgttca
gcccgccaccatcacaccacccgcaaagttcctctgccatctgaactcatgtaccacttc
caacatatgaaatgtaactgtatgatgggattgtttcctgagatacaccgagcctggctg
accatcgacagtgatatctatgtctggatgtatgaagatgggagtgatctagcatacttt
gatggtctccatgaaacaatcttaagtgtaggactggtaaaacccaaagctggtgtgttc
aagccatatatagagcacctcctggttctcactacaacctcagaaattgtcctccttgga
gtgtcgttctcccagccctctgaagctgaggtcagctctggtatgcacctgctgccagaa
cccttgttctctctacccaccgatggttcctatgtgctcaccatccagggcacgcaagat
ggacgcatcttcttgggcgccaaggatggctgcctctatgagcttgtgtatcaggccgta
gaagggtggttcagtcgcaagtgccaaaaggttaatcacacaagatcagctatttcttac
ctccttcctttccttgccttctcagaggatgatcccattaatcaggtggaagtggatgac
agccggcacattctttatactttgagtgaccgcggcacagtgacagtgtactaccttgga
gctgatgggaagagcacctctcgagtggtatctgtccctcacaacaacatcatgaatgct
gctctgcaggttgccaaaactgtggacaaaaccaatttcaagagtgtagtgagcctgtgt
cctattggtacctctgaatcccctcacattcatttggtagttgtcactggcacaggagtc
cgactctactacacaacaggacagctgaatggtaaccctagccaagcaccctatcagttg
acactactacatgtacgtttgccaccagggtttgctgccaatgctactgtgtacaggccc
accaaggtccacaaggctttgtattcccatggtatgtgtattctctgctctaatgaaagt
aatgaagctgacacagtttggacaatgagtagcgaccaatatccctaccaccatattctg
gctgagtctcagagcactcttgctgtggatggctatgtgtgggcattggctgatgtcaca
cccaagctgtggtgtgcagctctgaatcctccaacttctcaaggaactctgccacctctc
ctggtcacccagcaccagcatgctcccagacaactggtgctcctctctgccaatggtgct
cacatattaattttccagcggcctgtagataaactgcgttatttgttggaagaggctagt
ggagtagaggcatccatagtcaaggatttcttcacagacatgacaccaacacaagcatgt
accactgccttaatcctggctacagatcctaacattcaaaatacacaggcagcagagtgg
gccacccgtgctttgttcctttatggtgccagtattgacccacctgcacctacttccttt
ccccctcagtcaccagtcaattacagtttcaacccaccccaaatgtcaaccccacttcct
ggacaaaacatcagttcaacagttcctcaagacacacagttttcacctttgcacaatgct
ctttacctgtacttggcaagaattctgagacctgcatggtcaacaccagtagccaaaaga
attgaggttgaaggaaagccagtggttgtaagttgtatgacaggagaggaggttggtttc
ttggcatatcaagtcgagctgctgtccaagttcttggtgacaaaccaaggtggcacaacc
aatcctcttcagcctctaaacatatcaaataccaccctgaaccgaacccttggtgatgga
tcagagcgagcttccttgctggcattgaaacttctgcttgaccaggccagagaagtgctg
cggcttgtttctgaactcaccacacacaatttcaccgccattgtagggtggtctgcagaa
ggtgggtgtttgatgaacctgttcttgcaggaagtgcgtgctcagctccgaacagtgaca
ctaagagacttggtcctgactgggcgggacatctgccgcagcctcatcatggcactgctg
gacaggtatcatggagataatgcttcctctgatgcaatttctgagcgcctgagggacatc
tgcccaaacctgtaccgcattgaagatgccaagctagccaaagccaatgaaataattttg
agctctaaagcaaatccaaacaaaatagagaaagagaagggtttcaaggaagctgtagca
gtaagtagatatctgacttgtggtaaacagattggccaccatgtgaacataacaggcatc
tgcagtcagttggttagtggaggagcttatgaaagtgtagtggacctctgtctgagtgtg
gcctctcagagagacccaactggcagagctcttcattactataagaacaatgaaccagca
gaagaccatcagggatacatggccttcactgccaggatggaatgttaccgagtattgatg
gaccagctgaaccagctagtagggactggtgcagcccccaccagcctccccaagtgttcc
aacacggccaggtccacctacaccaccaccccagaccctcccttccacagatgccacaca
gtatgcccatcagttaatataagaagtatcacaatgataaacttaatagtagcaagcaca
gatgaactggctcatgtaacactataccagtggcttgtggacaccagtcgtactgatcga
ctgctgtccctctcctccccctacctggagaccttcctcacacgctccaatggacaagca
cctcttcatcacctcctctggcgttactatgaaaagaacaaggaattttataaagctgca
aagactctgctccttcttgcagaacaaagaggagacacctcagttggtgtgcgtgttgac
tatctttcccgcgctcacatgtgcctgagctcctgtgaaatgaacacagcctctaactat
gctgacttcatgttgcacttggaagaaaagaaggaggtagctaaagtccagttgatggta
ttggacagtcttcagtgtgaagcagctggtgctgatgtctttgctgagctcaactcttcc
cttttggctttgactgtcttatatgagaagtttgctgagccatggggattgtgggactgt
aagctggcaattcttcactgtgctggccattcagagcctcagctggtacagtcaatatgg
acgaagctgattgacaatgaattagagaaggcggcaccagtgggagtggagctaaaagtg
gacaggttgtccagcaagttgaagtccttggctcgcgtgtactcctctaatcctagttac
tttcctttagaacacattatcaagcactgtgaaattagatcagtccaacttcaagcagac
acctcctgggtagtgactactcttcaaggatgtggtattcctgtcagcaaactcatcaat
atttatcataagttgtaccgtagtggggaaagtgtgtgggaggtggagcattcaccccac
cacctgttgatggttctggcacacctcatcaacatgcttatagacacgtgtgcttctctg
caaccccaacaaaaacgagcactacgggagcagtgtttggactatgtggctgagtacctc
acaaacctgagtgcctcagctgacacatcagctggtatcatcatggctcacctcaagtca
tgtcaggctaggctggaacgtcttgtatga
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