Scylla paramamosain (green mud crab): 135105637
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Entry
135105637 CDS
T11531
Name
(RefSeq) ribonuclease P protein subunit p29-like
KO
K03538
ribonuclease P protein subunit POP4 [EC:
3.1.26.5
]
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135105637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sprm03009
]
135105637
03016 Transfer RNA biogenesis [BR:
sprm03016
]
135105637
03029 Mitochondrial biogenesis [BR:
sprm03029
]
135105637
Enzymes [BR:
sprm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
135105637
Ribosome biogenesis [BR:
sprm03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
135105637
Transfer RNA biogenesis [BR:
sprm03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
135105637
Mitochondrial biogenesis [BR:
sprm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
135105637
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P-MRP_p29
ManC_GMP_beta-helix
Motif
Other DBs
NCBI-GeneID:
135105637
NCBI-ProteinID:
XP_063870062
LinkDB
All DBs
Position
12:complement(7106144..7109947)
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AA seq
249 aa
AA seq
DB search
MERSTIYSPLPNVVTVRSASIIDLPASGPNTESMREELKGLVETWVPRDDKDEVETELKK
QFLLMEKKARVRPHKSLKQPEKKQQQPPPHRGKKRLTSKERRDLGLHLIDRTNKTFEMFL
PIHDLWKSYAQELLHISHFLQSGWNGDARDTKTETIQNRVRKMDYFGCFLRVTRSRCSEY
VGIQGIVIRETKNTLVMVCPDDHVKTIPKVHSEFSFVVDGVGFSIMGNHLHQRPAERAKH
NFKKLCLWL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaagtactatctacagtcccttaccaaatgtggtcactgtgaggtcagccagc
atcattgacctcccagcatcaggtcccaacacagaatctatgagagaagagctaaagggc
ttggtggaaacttgggtcccaagagatgacaaagatgaagtggaaactgagctgaaaaaa
cagttcctgttgatggaaaagaaggcaagagtgcggccacacaagtccctcaagcagcca
gagaagaagcagcagcagcctcccccacacagaggaaagaagcgcctcaccagtaaggag
aggcgagacctgggcctccaccttattgacaggaccaacaagaccttcgaaatgttcctt
cccattcatgacctgtggaagagctatgcccaggagcttctccatatcagtcacttcctg
cagagtggctggaatggggatgccagggacaccaaaactgaaaccattcaaaacagggtc
aggaagatggattactttggctgcttcctccgagtaaccaggtctcggtgttcagagtac
gtgggaatccaaggaatcgttatcagagagaccaaaaatactcttgtaatggtgtgccca
gatgaccatgtgaaaaccatccccaaggtgcatagtgagttcagctttgtggtggatggt
gttggtttttctattatggggaaccacttgcaccagagaccagcagagcgagctaaacac
aactttaagaagctgtgcctgtggctgtga
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