Scylla paramamosain (green mud crab): 135105714
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Entry
135105714 CDS
T11531
Name
(RefSeq) pre-mRNA-splicing factor 38B-like
KO
K12850
pre-mRNA-splicing factor 38B
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135105714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sprm03041
]
135105714
Spliceosome [BR:
sprm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
135105714
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Paralog
GFIT
Motif
Pfam:
PRP38
Peptidase_M26_C
Motif
Other DBs
NCBI-GeneID:
135105714
NCBI-ProteinID:
XP_063870199
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Position
12:13837163..13845383
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AA seq
425 aa
AA seq
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MKAGACEYEEDGEKGAAGNKKPNGLPIWGNEKTMNLNPLILTNIQSSQYFKVNLYQLKTY
HEVIDEIYYNVTHLEPWEKGSRKTSGQTGMCGGVRGVGAGGIVSTAFCILYKLYTLRLTR
KQVVGLLNHADSPYIRGLGFMYVRFTQPPADLWDWLEPYLDDEEEIDVRAGGGQTTTIGH
TVRHMLSKLEWYSTLFPRIPVPIQKELEKKLAEHAAAKAAANPTVAPPAKKDWYGGRPEA
EAVPQKEHGRSRGSSQEYNCRDERVRDTDRERERGRDRDGTRSQDRERDWQGDRTRERNG
DHDRSRNRHRDRERDRGQTDRERDRERDRERDRDRERDRDRERERDRGDRERERDRDRHR
HRERDHSHDRKHRRRDRYSYPDDRGDFAELLEREKHRIKKERKRDGSRERSRRSRSPDKD
RRRHH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaggtgcatgtgagtatgaggaggatggggagaagggggctgctgggaataag
aagcccaacgggttgccaatatggggcaatgaaaagaccatgaacctgaaccctctcatc
ctcaccaacatacagtcatcacagtacttcaaggtaaacctgtaccagctgaagacctac
catgaagtcattgatgaaatctactacaatgtgacccacctggagccgtgggagaagggc
agccgcaaaacctcgggtcagaccggcatgtgtggcggggtgcgaggtgtgggggcgggc
ggcattgtgtccaccgctttctgcatactgtacaagctgtacacgctgcgcctcaccagg
aagcaggtggtgggcctcctcaaccatgccgactcaccctacatccggggcctcggcttc
atgtacgtcaggtttactcagccgccagcagacctgtgggactggttggagccatacctg
gatgatgaggaggaaatagatgtgcgtgcaggtggcggccagaccaccaccattggccac
acggtgcgccacatgctgtctaagctagagtggtactcaactctcttccctcgtatcccc
gtccccattcagaaggaactagagaagaagttggcggagcatgctgctgccaaggctgct
gctaatcccactgttgccccaccagctaagaaggattggtatggtggtcgacctgaagca
gaagctgtcccacaaaaagaacatgggaggtcgagagggtccagtcaagagtacaactgt
cgggatgaaagagttcgagacacagaccgagagagggaacggggaagggacagggatggt
acacgttcacaggaccgggagagggactggcagggtgaccgcacaagagagaggaatgga
gaccatgaccgcagccgaaatagacatcgggacagagaacgcgaccgaggacagaccgac
cgtgaacgtgacagagagcgtgacagagaaagagacagagacagagagagagacagagac
agagagagggagcgggatagaggggacagagagagggagagagaccgtgaccgtcacaga
catcgagagagagaccacagccatgacaggaagcatcggcgacgagaccgctacagctac
ccagatgacagaggagactttgctgaactgctggagagggaaaaacatcgtatcaagaaa
gaacgcaaaagagatggcagtcgagagcgatcaagaagaagccgatcgccagacaaggat
cgccgtcgccaccactga
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