Scylla paramamosain (green mud crab): 135106416
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Entry
135106416 CDS
T11531
Name
(RefSeq) intraflagellar transport protein 70A-like
KO
K19683
tetratricopeptide repeat protein 30
Organism
sprm Scylla paramamosain (green mud crab)
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sprm03037
]
135106416
Cilium and associated proteins [BR:
sprm03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
135106416
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Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_16
TPR_12
TPR_6
ANAPC3
TPR_CcmH_CycH
TPR_14
TPR_1
TPR_Slam
ARM_TT21_2nd
ARM_TT21_C
HrpB1_HrpK
TPR-S
TPR_EMC2
DUF285
Motif
Other DBs
NCBI-GeneID:
135106416
NCBI-ProteinID:
XP_063871484
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All DBs
Position
13:9304027..9321591
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AA seq
651 aa
AA seq
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MMLQNIQIRDGEYTKTIYSMIKEQRYSEAVQILNHIIESYPSSRAALSLLAYCYFYMQDF
VNAANCYEHLMLLFPDIEEYRMYYAQSLYQACLYEEAMKVTHQIEAPEYAGSITKLQAAI
KYGEEDLPGAKSLVDQCPADDPDTEINHGCLLYKEGRYEEACQKFTSALQVAGYQPHLSY
NIALCHYRLKQYAPALKHIADIIERGIREHPELSVGMTTEGIEVRSVGNTLTLHETALIE
AFNLKAAIEYQLKNYEAAREALTDMPPRSEEELDAVTLHNQALMNMETKPTEGFEKMQFL
LGQNPFPPETFGNLLLLYCKYEYYHLAADVLAENAHLTYKYLTPHLFDFLDALITQQTAA
SEAYRKFDELGSRHIELLRKLTKVVQEARQNHDDDQVKTAVNEYEEILERYIPVLMAQAK
IYWDLENYSQVEKIFRKSVEFCNESDIWKLNVAHVLFMQENKFKEATGFYEPIVKKNYDN
ILNVSAIVLANLCVSYIMTSQNEEAEELMRKIEKEEEHLAYEDPDKKIYHLCIVNLVIGT
LYCAKGNYEFGISRVIKSLEPYNKKLGTDTWYYAKRCFLSLIENLAKHMITVKDSVIQEC
IQFLEHCEVYGRSVKGLIEHPLEEMAIHPGKNTVTYEARLLKALLLQIQQM
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttcaaaatattcagattcgagatggggagtatacaaagaccatatattccatg
ataaaggaacaacgatatagtgaagcagtgcagattctgaaccatatcattgagtcctat
ccaagttcccgagctgcattgtctctcctcgcctactgttatttctacatgcaagacttt
gtcaatgctgctaactgctatgaacacctcatgctcctcttccctgacattgaggagtac
cgcatgtactatgcccagtcactttatcaggcctgcttatatgaggaggctatgaaggtg
acccaccagatagaggcaccagagtatgcaggaagcattaccaaattgcaggctgcaatc
aaatatggtgaagaagaccttcctggagctaagagcttagttgatcagtgtccagcagat
gacccagatacagaaataaatcatgggtgtctgttgtacaaggaaggcagatatgaggaa
gcctgccagaaattcaccagtgccctgcaagtggcaggataccagcctcatctgtcctat
aatattgctttgtgccactaccgacttaaacagtatgctccagcccttaaacacattgcg
gatataatcgagcgaggcatcagagaacatcctgaattgagtgtgggcatgacaacagag
ggcattgaggtgcgcagtgtgggaaacactcttaccctacatgaaacagctcttattgaa
gccttcaaccttaaagctgccattgaataccagcttaagaactatgaagctgcccgagaa
gctctaactgacatgcctccccgatcagaagaagagctcgatgcagtgactttacataac
caggccctaatgaatatggaaactaagccaacagaaggatttgagaagatgcagtttctg
ctgggccagaatccatttcctcctgaaacatttggcaaccttctactcctttattgcaaa
tatgaatattaccacttagcagctgatgtccttgctgaaaatgctcatcttacttataaa
tatctaacacctcatctctttgacttccttgatgccttaatcactcagcaaactgcagcc
tctgaagcttatcgtaaatttgatgaattaggatcacgacacattgagttgctgcggaaa
ttaacaaaggtggtacaagaagctcggcaaaaccatgatgatgaccaggtgaagacagct
gtgaatgaatatgaagagattttggagaggtacattccagtcctcatggctcaggccaag
atttactgggacttagaaaattattcccaagtggaaaagatcttcagaaagtctgtagaa
ttttgcaatgaatctgacatatggaagctaaatgttgcacatgttttattcatgcaagaa
aacaagttcaaagaagccacaggattttatgaaccaattgtgaagaagaactatgataat
atattaaatgtgagtgcaattgtgctggccaacttgtgtgtctcatacatcatgactagt
caaaatgaggaagcagaagagctcatgaggaagattgaaaaggaagaggaacatctagca
tatgaagacccagacaagaaaatttatcatctatgcatagtgaatttggttattgggacc
ctctattgtgccaagggaaactatgagtttggtatctcaagggtaatcaagagtctagag
ccatacaacaagaagcttggaacagatacctggtattatgccaaaagatgcttcctttcc
cttatagaaaatttggccaagcatatgataactgtgaaggattcagtaattcaagaatgc
atacagtttcttgagcactgtgaagtgtatgggagaagtgtgaaaggcctgattgaacat
cccttggaggaaatggccatccatccaggcaagaacacagtcacctatgaagctcgctta
ctgaaggctcttctgcttcagatccaacagatgtag
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