Scylla paramamosain (green mud crab): 135106499
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Entry
135106499 CDS
T11531
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135106499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sprm03009
]
135106499
Ribosome biogenesis [BR:
sprm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
135106499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_2nd
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
Utp13
WD40_Gbeta
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
NBCH_WD40
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_EIPR1
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
WD40_RFWD3
WDR54
BigA_N
Beta-prop_WDR35_2nd
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
135106499
NCBI-ProteinID:
XP_063871633
LinkDB
All DBs
Position
13:complement(21192636..21200342)
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AA seq
1048 aa
AA seq
DB search
MGSKALLKTNFTVEAKYDAYFTGQRVEVTSDGSAVVCECGDSVGVVSLASGKVTGRISCE
EDQVTCLALSPDDSYLVVALKSTSIQQHQWPSLELVRSFKSYHRGPVTAMAWDTTSTLMV
SGGADSAARVWDLVNKYCTHSLKGASGVFGAVTFHPELTKVPQVYGAVANNIHVWTLESG
SSTMSATLAGHHSAVTAIQVTHDTSQLVSCGLDRVVILWDLTTFNSLKVVPVLESLSGIV
LQPQGSLFPGAQEGSDHVYALVVGDKGAPSVWEVDSGREVWRAPQPLLSLPDKDGVTLVN
QMVYCKALESVVMTTYDHSILFAKISSMKIWKQLAGYNDQILDAVFVGAGESHLVVATNS
IQLRIYHCESFSCCLIQGHEALVLALARHPTLPSIFASSSHDNSVRVWRLREDGGADCLA
IAKGHTLSVGSVAISQGFMVTGSKDMCIKKWILGNEILESSKESVASVVPLTSSYTEKAH
EKDINSMCVSVNGKLIATGSQDKTAKVWDSSSLALLGVLRGHRRGLWCVQFSPVDEVLAT
ASADATIKIWTVTDFSNAITLEGHSVSVLRLCWVSEGQQLLSTASDGLLKLWTIKTRQCV
QTFDQHQDKAWAMAVSEDEKRVVTGGEDAALVMWRDVTQEEKDKAAEEAARFAAEEQTLL
NLIQNKEWTKALAIAVRLGQPGRALKIMKTLLDEMPGELPAVMAKLRLDQVAALLEFATS
WNTKTKDSREAQSIINVVLRMYLPEELEGLDGWQKTLEGLLPYTERHQRRVAALHQSAGI
LSYMSSCLTLGADPSIVQLPPVMDEAELLTMIPVQKPTTENMESDNNDDDDDNDENDDDD
DDEEEEEEEGDEEVKITLQNSIMKVDEGSESDSDEEEEAVEEMEMHPAIKDEGERNGAVG
SDEDEGIEEGSDGNGGSEEDSDQERTSEAPLASRDDLEANYVLEKIQASSGSEDEEVVSG
EEQEEDQEVGRKRKGFSVDQLQLERKRKNKKMKGSRENAKEGVHMKNRSKIQKDSFSQRG
QQRSKGGKKGKGASAAQAGRGKKRKRIM
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgggctctaaggcactcctcaagaccaactttactgttgaggcgaagtatgatgcttac
ttcaccggccagcgtgtcgaggtgaccagtgatgggtctgctgtggtgtgtgagtgtggg
gacagtgtgggggtggtgagcctggcatcagggaaagtcacaggccgcatcagttgtgag
gaagaccaggtgacttgccttgccctgtccccagatgactcctacctggtggtggctctg
aagtccacctccatccagcaacatcaatggccgagtctagagttggtgcggagcttcaaa
tcataccaccgtggcccagtgacagccatggcttgggacaccacgtccaccctgatggtg
tcaggcggcgcagactctgctgcccgtgtctgggaccttgtcaacaaatactgcacacat
agcctcaagggagcctctggtgtgtttggggcagtcacattccatcctgagctgacaaag
gttccacaagtgtatggtgctgttgccaataacatccatgtgtggacactggagtctggc
tcatcgactatgagtgcaaccctggcaggccaccactcagctgtcactgccatccaggtg
acccatgacacttcacagctggtcagttgtggcctggatcgggtggtcatcctgtgggac
cttaccacctttaatagcctgaaagttgtaccagtgctggagtctctgtctgggattgtg
ctgcagccccaaggctcacttttccctggggcacaggaaggcagtgaccatgtttatgcc
ttggtagtcggagacaaaggtgccccttcagtgtgggaggtggacagtgggagggaggtg
tggcgagcacctcaacctctactgagcctgcctgacaaggacggggtcacactggttaat
cagatggtatattgtaaagctctggagtctgtggtcatgactacctatgaccattccata
ctatttgctaaaatctcctccatgaagatctggaaacagcttgcagggtacaatgatcag
atcttggatgctgtgtttgtgggagcgggggagagtcatcttgttgtggccaccaacagc
atacagctgcgcatataccactgtgagagtttcagctgctgcctcatacaaggccatgag
gcgctggtactggctcttgcccgtcacccaacattgccctccatatttgcttccagttcc
catgacaacagtgtacgtgtgtggcgtctgagggaggatggtggggctgattgccttgcc
attgccaagggacacacactcagcgtgggcagcgtggcaatctcacaaggctttatggtg
accggcagtaaggacatgtgcataaagaaatggatcctgggcaatgagatcctggagagc
agtaaagaaagtgtggcctctgttgtgccgctgacctccagctacacggagaaggcacat
gagaaggacatcaacagcatgtgtgtgtcagtcaatgggaagctgattgcaacaggctca
caggacaaaactgccaaggtgtgggatagcagcagcctggccttgctgggggtgttgcgc
ggccaccggcgagggttgtggtgtgtccagttctccccggtggatgaggtcctggccact
gcctcagctgatgccaccatcaagatatggacagtgactgatttttcaaatgctattact
ctagagggacacagtgtaagtgtgctgcggctgtgctgggtgtcagagggtcagcagctt
ctctccactgcctctgatggcctcctcaagctgtggacaatcaagacacgccagtgtgtg
caaacatttgaccagcaccaggacaaggcgtgggccatggctgtgagtgaggacgagaag
cgggtggtgacaggaggggaggatgcggcactggtgatgtggagggacgtgactcaggag
gagaaggacaaggcagcagaggaggcagccagatttgctgccgaggagcaaactctcctt
aacctcattcagaacaaggaatggacaaaggcacttgccattgctgtgcgtcttggccag
cctggccgagccctcaagatcatgaagacactgcttgatgagatgcctggggagcttcca
gctgtcatggccaagctgcggctggaccaggtggccgccctgctggagtttgctacatcc
tggaacaccaagaccaaggactccagagaggctcagagcatcatcaatgtggtgctgagg
atgtacctgcctgaggagctggagggcctggatggctggcagaagacactggagggtctg
ttgccatacactgagcgtcaccagcgtagggtggcagcgctgcaccagtcggcaggcatc
ctgagctacatgtcatcctgcctcactctgggagctgacccaagcattgtccagcttcct
cccgtgatggatgaggcagagctcctgacgatgattcctgttcagaagcccacaacagag
aacatggagagtgataataatgatgatgatgatgataatgatgaaaatgatgatgatgat
gatgatgaagaggaggaggaggaggaaggtgatgaggaagtcaaaattacacttcagaat
tccataatgaaggttgatgaagggagtgagagtgacagtgatgaagaagaggaggctgtt
gaagagatggagatgcatcctgcaataaaagacgaaggtgaaagaaacggtgcagttggc
agtgatgaggatgagggtattgaggaaggcagtgatggaaatggtggcagtgaggaggac
agtgaccaagaaaggactagtgaagctcctcttgcctccagagatgatttggaggctaat
tatgtacttgagaaaatacaggcaagctcaggaagtgaagatgaagaagttgtgtcaggt
gaggagcaggaggaagaccaggaggtgggaaggaagaggaagggattctctgtggaccaa
ctgcaacttgaaagaaaaaggaagaacaaaaagatgaaaggctccagggaaaatgcaaag
gaaggagttcatatgaagaacagaagtaaaatacaaaaggacagtttcagccaaagaggg
cagcaaagaagtaagggagggaagaagggaaagggggcatctgcagcacaggctgggaga
ggcaagaaaaggaaaagaataatgtaa
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