Scylla paramamosain (green mud crab): 135107136
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Entry
135107136 CDS
T11531
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-(apurinic or apyrimidinic site) endonuclease-like
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
135107136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprm03400
]
135107136
Enzymes [BR:
sprm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
135107136
DNA repair and recombination proteins [BR:
sprm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
135107136
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
135107136
NCBI-ProteinID:
XP_063872916
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All DBs
Position
14:21997128..22009467
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AA seq
422 aa
AA seq
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MTVYISELRTCDQQSLAKFLNMSEEQTVLIVKTMKLSYTSEKYLHFITSHFTSVLAAQSP
HVTFLLCCCTTITRPYHLPDKHNHVSADPACTTLIKIKVCMSGLRLGGSRLLFSVLRIAS
PRVLSGPFTMPPKRKQEKAEETQEKESKKVKTDDFSSDAKTNDGKKWNLKIVSWNVDGLR
AWMKKDGMSVFEKEKPDVICLQETKCSDDKLPGDIKNVKGYKSYFMSAKKDGYSGVALIS
KKEPLSVTYGLDDETHDDEGRCITAEYEDFYLVTAYVPNAGRKLVTLDKRMDWDPKFRNY
LKELDAKKPVIMCGDLNVAHKEIDLANPKSNKKNAGFTPEERAGFTDLLAEGFVDSFRHL
YPDKTAQYTFWTYMXNCRAKNVGWRLDYFVLSERLVPNLCDNLIRTSLYGSDHCPITLLM
HL
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgtatatctctgagctgcggacatgtgatcaacaaagcctggccaagtttctg
aatatgagtgaagaacaaactgtgctcattgtgaagactatgaaattgtcatacacaagt
gaaaagtacctgcattttataacctcccacttcacttcagttcttgcagcacagagccct
cacgtgacgttcctactatgctgttgcaccactattacacggccctatcacctcccggac
aagcataatcacgtttctgcggaccccgcctgcaccacactcatcaagatcaaggtctgc
atgtcgggactgaggcttggcgggtcgagactactgtttagtgttcttcgtattgcatcc
cctcgcgtgttatccggtccattcaccatgccaccgaagaggaaacaagagaaagctgaa
gaaacccaagagaaggagtccaaaaaggtcaagacagatgacttttcctcagatgccaag
acaaatgatggcaagaagtggaacctgaaaattgtgtcttggaatgttgatgggctgcgg
gcttggatgaagaaagatgggatgtctgtctttgagaaggagaagccagatgttatttgc
cttcaggagaccaagtgtagtgatgacaagcttccaggagatataaaaaatgtgaaaggt
tataagagttactttatgtcagctaagaaggatggctattctggtgttgccctgatttct
aagaaggaacccctgtcagttacatatggactggatgacgagacccatgatgatgaaggt
cgctgcatcactgcggaatatgaagacttttatctagtgacagcatatgttcccaatgct
ggcaggaaactagttacattggacaagagaatggactgggaccctaaattccgcaattat
ttgaaggaattggatgccaagaaacctgtaatcatgtgtggagacctcaatgtggcacac
aaggaaattgatcttgccaaccctaagagcaataaaaaaaatgctgggtttactcctgag
gagagagctggtttcactgatctcttggcggaagggtttgtggactcttttaggcacctt
tacccagacaagacagctcagtacaccttctggacttacaggaattgccgggccaagaat
gtgggctggaggctggattattttgtcttgtctgagcgcctggtaccaaatctgtgtgac
aacctgatccgtacttccctgtatggatcagaccactgccccatcactctactcatgcat
ctgtga
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