Scylla paramamosain (green mud crab): 135107355
Help
Entry
135107355 CDS
T11531
Name
(RefSeq) autophagy-related protein 16-1-like
KO
K17890
autophagy-related protein 16-1
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm04136
Autophagy - other
sprm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135107355
04136 Autophagy - other
135107355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sprm04131
]
135107355
03029 Mitochondrial biogenesis [BR:
sprm03029
]
135107355
Membrane trafficking [BR:
sprm04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
135107355
Others
Specific organelles associated proteins
Auto phagosome
135107355
Mitochondrial biogenesis [BR:
sprm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
135107355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
ATG16
Beta-prop_IFT122_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
DSE1_N
Beta-prop_Aladin
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_ACSF4
Beta-prop_VPS8
Beta-prop_DCAF4
ASA1
CFAP251_N
eIF2A
Beta-prop_HPS5
Beta-prop_NOL10_N
Beta-prop_SCAP
Beta-prop_WDR19_1st
WD40_RFWD3
PAC11
Ge1_WD40
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_WDR41
CLIP1
Beta-prop_Nup120_160
Tricorn_2nd
Cytochrom_D1
TMF_DNA_bd
Ald_deCOase
ATG14
bCoV_NSP3_N
Motif
Other DBs
NCBI-GeneID:
135107355
NCBI-ProteinID:
XP_063873165
LinkDB
All DBs
Position
15:7395074..7421955
Genome browser
AA seq
566 aa
AA seq
DB search
MAWSKSGGGDWRQQIYNNLRERNKKEYENISDLIQLHTRLFEQSETLKAEILQLTIQNEK
LQQSNLQLLSCGGGGSGGGNGGGGGGECGGTASPGVVQKLEQKIYKLQEELTDLHRKKSE
NSQQLVELNQCLQEREKVVAVKDNKLAEYESDLMILREELANKETALADVQAINQVLRDE
YQTLNLAFTALEEKYRKEKEENRDLIDRWMAQKAKDAEKLNLENDSILRKRQMLVEEQLK
EAAREPRQVTMDDKFACSPPLCLMAVLPSKAYHKFDAHDGEVNSVCFSPQGRILATGGVD
RKLKLWDIGHAVVEARGILTGSNAGVTAIDFDAEESLILGASNDFASRVWTVADHRLRHT
LTGHSGKVMAARFLSESAKVVTGSHDRTLKIWDLRSRACIRTIFAGSSCNDLVPSDSAAT
TIISGHFDKKIRFWDTRTEQSANEVSLQGKITSLSLSSDGFYLLSCVRDDSLKILDLRKN
HVIHTFTGDGFHVGADYTRATFSPDATYVAVGSGDGALYIWNVNTAKLEKTLREHTSCVV
ACTWHPSGKSLVSCDRGKKVIAWSDF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcctggagtaagtctggtggcggagattggcgccagcaaatctacaacaatctgcgg
gaacggaacaagaaggaatacgagaacatcagtgatctcatccaattacatactcgactt
tttgagcagagtgagactttgaaggctgagatcctgcagctcaccattcagaatgagaaa
ctccagcaaagtaacctgcagttgctgagttgtggtggtggaggtagtggtggtggtaat
ggtggtggtggtggaggggagtgtggagggactgcttcacctggtgtggtgcagaaattg
gaacaaaagatctacaaattacaagaagaattaacggatttacacagaaaaaagagtgag
aattcacagcagttggtagaattaaatcagtgccttcaggaacgggaaaaagtagttgct
gtcaaggacaacaaactagcagagtatgagtcagacttgatgatcctgcgagaggagctt
gccaataaggagacagcccttgcagatgtacaggcaatcaaccaggtgctgcgcgatgag
taccagactctcaacttggccttcacggcgctggaggagaagtataggaaagaaaaggaa
gaaaaccgggacctcattgaccgatggatggcacagaaagccaaggatgcagagaagctc
aacctggagaatgactcaatcttaaggaaacgacaaatgttggttgaagaacagctcaaa
gaagcagctcgggaacccaggcaggtgaccatggacgacaagtttgcctgcagtcctccc
ctgtgccttatggcagtgcttccctccaaggcctaccacaaatttgatgctcatgatggg
gaggtgaattctgtgtgcttcagccctcaagggaggattctggccactggtggggtggat
aggaagctcaagctgtgggacattggccatgccgtagtggaagctagaggcatattgaca
ggcagcaatgcaggggtaacagccattgattttgatgctgaggagtcattgattcttggt
gcctctaatgactttgccagcagagtctggacagtggcagatcatagattaaggcacaca
ctcacaggacactctggtaaggttatggcagcaagattcctgtcagagtcagctaaggtc
gtcactggctcccatgatcgtacgcttaaaatatgggacctgaggagtcgagcttgtatc
agaacaatctttgctggatcaagttgtaatgaccttgtgccatctgacagtgcagcaaca
accataatttctggtcactttgataagaaaatcagattctgggacacacggacagaacaa
tcagcaaatgaagtgtctttacagggcaagattacttccctctccttatcaagtgatggg
ttttacctgttaagttgtgttcgtgatgattccttgaaaatcttagatcttcggaagaac
catgtgatccacacatttacgggtgatggcttccatgtgggagcagattacactcgggca
actttctctcctgatgctacttatgtagcagtgggtagtggtgatggtgctttatacatc
tggaatgtcaatacagccaagctggagaagactctgagggagcacacatcatgtgtagtt
gcctgtacttggcatccaagcggaaagtcactagtgtcttgtgaccgtggcaagaaggtc
attgcttggtccgatttctag
DBGET
integrated database retrieval system
