KEGG   Scylla paramamosain (green mud crab): 135107366
Entry
135107366         CDS       T11531                                 
Name
(RefSeq) LOW QUALITY PROTEIN: actin-interacting protein 1-like
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
sprm  Scylla paramamosain (green mud crab)
Brite
KEGG Orthology (KO) [BR:sprm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:sprm04990]
    135107366
Domain-containing proteins not elsewhere classified [BR:sprm04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   135107366
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML EIF3I ANAPC4_WD40 WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st eIF2A Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_HPS5 CFAP251_N WD40_MABP1-WDR62_1st DSE1_N Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_NOL10_N Beta-prop_TEP1_C PAC11 Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Tricorn_2nd WD40_like Beta-prop_SCAP TRM82_WD Beta-prop_RIG_1st WD40_RFWD3 DUF5711 choice_anch_I HPS3_N
Other DBs
NCBI-GeneID: 135107366
NCBI-ProteinID: XP_063873196
LinkDB
Position
15:complement(8514190..8529583)
AA seq 601 aa
MSYSNLSIWACLPRTQRGQPIVLGTDPKGKKLLYVHANSVIIRDIENPSIAEVYTEHSTQ
VNVAQYAPSGFYICSGDQHGKVRIWDTINPEHILKAEYQPLGGPIRDICWSPDSQRICVV
GEGRGKFAHVFMMDTGASVKGDLSGHTKAINSVSWKPTRPFRIATGSEDSKAAFFEGPPF
VFKCTKGDHGKFVQSVRFSPNGERFATGGFDGKIFVYNGSSSDLDKELGSPAHKGGIYAV
SWSPDSKRLLSASGDKTCKVWDVESGDLVADFPMGSDLEDQQMSCLWAGNYLLSISLSGF
INYLDLDNPSKPKKIIKGHNKPITRVGLSPDKSTLYTTGVDGTVTVWDVATGDNDRIAGK
GHGNHVSGLVVKGDTIFTAGIDDSVKYIDPVEKTYTGKSISLGSQPKMIAAVDDGIIAVT
TQEICVLKDDKKVGSFPISWDGLCVSAAGGGNDEVAIGGADNLVHIYALSGNTLTEKKTL
EHLGAVTDVEYSPDGRYLVACDANRKVVVYSLPTYEKFNKIEWGFHNARINCVAWSPDSL
MVASGSLDTMIIIWSMTQPNKHIIIKNSHPQSQVTGLLWLNNETLISVGHDGLVKTWSVT
F
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgtcgtattccaacctttccatctgggcatgtttgccccgaacacaaagaggacagcct
attgtgctgggcactgatccaaagggaaagaaacttctgtatgtccatgcaaactctgtc
atcattcgtgatatagagaatccttccattgctgaggtatatacagaacactccacccag
gtcaatgtggctcagtatgctccatcaggcttctacatatgctctggggatcaacatggc
aaagtgcgaatttgggacacaatcaacccagagcacatcctgaaagcagaataccagcca
ctgggaggacccatccgggacatctgctggtccccggactcccagcggatatgtgttgtt
ggtgaaggcagaggaaaatttgcccatgtgtttatgatggacactggagcatcagtgaag
ggtgatctgtcaggccacaccaaggccattaactctgttagctggaaaccaactcgacca
ttccgtattgctacaggctctgaagacagcaaggctgccttctttgaaggaccaccattt
gtcttcaagtgcaccaagggtgaccacgggaagtttgtgcagtctgtgcgattttctccc
aatggtgaaagatttgctactggaggatttgatggcaaaatttttgtatacaatggtagc
agttcagacctagataaagagcttggcagtcctgcacataagggaggcatttatgcagtg
tcatggagtcctgacagtaagcgtttgctctctgccagcggagacaaaacttgcaaagtg
tgggatgtggagtcgggagatttagtggctgacttcccaatgggttctgatctggaagat
caacagatgtcttgtctatgggccggaaactaccttctctccatctccctctcaggtttc
atcaattacctggatttggacaacccatccaagccaaaaaaaattataaagggccacaac
aagccaatcactagggtgggactctctccagacaagagcaccctctatactactggggtt
gatggcacagtcacagtgtgggatgttgccacaggtgacaatgatcgcattgctggcaag
ggtcatggaaaccatgtcagtggccttgtggtgaaaggagacaccatcttcacagctggc
attgatgacagtgttaagtatatagatccggttgagaagacctacacaggaaaatctatc
tcacttgggtcacaacccaagatgattgctgctgtggatgatggcattattgcagtaaca
actcaggagatttgtgtgttgaaagatgataagaaggttggaagcttccccatcagctgg
gatgggctgtgtgtatcagctgctggtggagggaatgatgaggtggcaataggaggagct
gataaccttgttcatatctatgctctcagtggcaacacactgactgagaaaaagacgctg
gaacacttaggagcagtgacagacgtcgagtattcccctgatggccgttacctggttgct
tgtgatgctaaccgtaaggtggtggtttactcccttcccacatatgaaaagttcaataag
atagagtggggcttccacaatgcacgcatcaactgtgtggcttggagccctgacagcctc
atggtggctagtggctccctggatacaatgattattatctggagtatgactcaacccaac
aagcacatcattattaaaaattcccatccacagtctcaagtgacaggccttctgtggttg
aacaatgagacactaatatctgtagggcacgatggactggtgaagacttggagtgtcacc
ttttaa

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