Scylla paramamosain (green mud crab): 135107498
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Entry
135107498 CDS
T11531
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03030
DNA replication
sprm03410
Base excision repair
sprm03420
Nucleotide excision repair
sprm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
135107498
03410 Base excision repair
135107498
03420 Nucleotide excision repair
135107498
03430 Mismatch repair
135107498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sprm03032
]
135107498
03036 Chromosome and associated proteins [BR:
sprm03036
]
135107498
03400 DNA repair and recombination proteins [BR:
sprm03400
]
135107498
DNA replication proteins [BR:
sprm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
135107498
DNA Replication Termination Factors
ELG1-RFC complex
135107498
Chromosome and associated proteins [BR:
sprm03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
135107498
DNA repair and recombination proteins [BR:
sprm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
135107498
Check point factors
HRAD17(Rad24)-RFC complex
135107498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
135107498
NCBI-ProteinID:
XP_063873514
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Position
15:14805378..14817835
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AA seq
348 aa
AA seq
DB search
MAGGESEMEVDPPKESRNKDKASPSETSHAPWIEKYRPTTFPEIVGNEETVARLEVFAKQ
GNVPNIIIAGPPGVGKTTTILCLARALLGPSFREAVMELNASNDRGIDVVRNKIKMFAQQ
KVTLPKGKHKIIILDEADSMTDGAQQALRRTMEIYSNTTRFALACNSSEKIIEPIQSRCA
MLRYSKLTDAQILNKLQHVCSKEDLSYTDDGLEAILFTAQGDMRQALNNLQSTAQGFGHV
SSENVFKVCDEPHPVMVKEMIQHCTKANFDEAYKILAHLWKLGYASEDIISIIFRVCKNT
DMAEFLKLEFIKEIGYTHMRIVQGTSSLLQLSGLLAKLCSKSLEPIQV
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcggtgagtcagagatggaggtagatcctccgaaagagtctagaaataaagac
aaagcctcaccctcggagacatcacatgcaccatggattgaaaaataccggcccaccact
tttccagaaattgttggcaatgaagaaactgtggcaagactagaagtttttgccaaacaa
ggcaatgttccaaacattattattgctggaccaccgggtgtagggaagacaaccacgata
ctgtgtctggcaagagcacttcttggtccaagtttccgagaagcagtgatggaactgaat
gcttcaaatgaccgtggcattgatgttgttcggaataaaattaagatgtttgcgcagcag
aaagttacgcttcctaaaggaaaacataaaattataattttggatgaagcagatagcatg
actgatggtgcccaacaagccctgcggaggaccatggaaatctactccaacaccactcgc
tttgccctggcttgtaattcctcagaaaagattattgagcctattcagtcacgatgtgct
atgctgaggtattctaaacttactgatgctcagatactgaacaaactccagcatgtatgt
tctaaggaagatttgagttatacagatgatgggttggaagctatactcttcacagcccaa
ggagatatgaggcaagctctcaacaacctccagtctactgcacaaggctttggtcatgta
tcctcagaaaatgtattcaaagtttgtgatgagccacatccagtgatggtaaaggaaatg
atccagcattgcactaaggccaactttgacgaagcttataagatactggctcatctttgg
aagttgggttatgcctctgaggacatcatctccattatctttagagtatgcaagaataca
gatatggcagaatttctcaaattagaatttatcaaggaaatagggtacacacacatgcgc
attgtgcagggaacttcatcacttctccagctttcaggacttcttgcaaagttatgttca
aaatctcttgagcccatccaggtgtag
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