Scylla paramamosain (green mud crab): 135107905
Help
Entry
135107905 CDS
T11531
Name
(RefSeq) UV-stimulated scaffold protein A-like
KO
K23720
UV-stimulated scaffold protein A
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
135107905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprm03400
]
135107905
DNA repair and recombination proteins [BR:
sprm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
135107905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
vRNAP_dom
Motif
Other DBs
NCBI-GeneID:
135107905
NCBI-ProteinID:
XP_063874352
LinkDB
All DBs
Position
16:4716267..4719848
Genome browser
AA seq
645 aa
AA seq
DB search
MDGDQRAAHLKYLVEELTTSGKDNLDEEKFKKIKKICKQSDIYVVELYRLVIKQLKKKHA
EIRYSAFQICDEIFRRSHCFRELLLKDFMQFVDLALGLDPKKPLPKPDAAARKLKQKCVE
VIQHWYDHFSDGYLTLKQAYSYLRDCKKVDFAELTARTEAEQQRAEQERQKAEEIKNKKI
EKIKRELEGSSKEINDCITQFHNCFKLLIPDVHDFFIPLSSEEVGSQGEGLVSHGEKGIQ
EEASNDDDEELEENAEYGSEFMRGHGIMKGTNVKINLEDVRKVQRTEDNEVVIENLKEYI
SILNTKLLPSVRRWEEIIQPYSAGNESLIKTIIDHKISIQNCVKRFESLNIVHKENQNIT
KDINSDSDDDDDDFIEVPWDDPRVVRAAASEAALLGVTKHSSNHSASSQPDDPDNQPSSS
GLCHTSSQVQSAGPSSSKTSESYRFPDEYLNKETSAPKRHQNPLAGLSQVWTATADLHEQ
EEVQSTGGILGIATQRVNYERSWEPVKWACRAPLKTGQLCPRKDREKCPFHGPIVPRDET
GKPLRPEDAAREQAAREQYERDHPAWQDPQLLAELKAATGVDLKVDKGRRKRKHKYENLT
DLKKTTPKERLAKKILSKKAVRRLNVALDKEHRSAPNTSSDFRFS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgaccagcgggccgcacatcttaagtatctggtggaagagttgacaacatca
gggaaagataatcttgatgaagaaaaattcaagaaaattaagaaaatatgtaagcagtct
gatatatatgttgtagaactatacagacttgtcatcaagcaactgaagaaaaagcatgct
gaaatacgatacagtgcatttcagatttgtgatgagatttttcgtaggtctcactgtttt
cgagagttgctcctgaaagacttcatgcagtttgtagatcttgctttaggtttagatcct
aagaaacccttaccaaagcctgatgcagcagctagaaaactcaagcagaagtgtgttgaa
gtcattcagcattggtatgaccattttagtgatgggtatttaacactaaagcaggcatat
agctatttaagagattgtaaaaaagttgattttgctgaacttacagccagaactgaagca
gaacaacagagagcagagcaggagagacaaaaggcagaagaaataaagaataagaagatt
gaaaagattaaaagggagcttgagggaagttccaaagaaataaatgattgcataactcag
tttcacaactgtttcaaattattgattccagatgttcatgattttttcattcctctcagt
agtgaagaagttggcagtcagggggaaggtcttgtatctcatggtgaaaagggtattcaa
gaagaggcatcaaatgatgatgatgaggaactggaagaaaatgctgaatatggttcagaa
tttatgcgtggtcatgggatcatgaaagggacaaatgttaaaatcaatctggaagatgtt
agaaaggtgcagaggactgaagacaatgaagttgtgatagagaacttaaaagagtacatt
agtatcttaaatactaaactattacctagtgtcagaagatgggaagaaattattcagcct
tacagtgcaggtaatgaaagtttaattaagactattattgatcacaagatatccatacaa
aactgtgtgaaaagatttgagtcgctgaatattgttcataaagaaaaccaaaatataacc
aaagatataaattctgatagtgatgatgatgatgatgacttcatagaggtaccttgggat
gacccaagagtggtgagggcagctgcctcagaggctgctttgcttggtgtcaccaaacat
tcatccaaccattcagcctcatcgcagcctgatgaccctgataatcagccatcatcttct
ggtttgtgtcacacatcctctcaggtgcagtctgcaggtcctagtagcagtaaaacatca
gaaagttatagatttcctgatgaatatcttaataaagaaacatcagcaccaaagcgccat
cagaaccctcttgcaggactaagccaagtgtggacagccacagcagatctacatgaacag
gaggaagttcaaagtacaggaggcattttagggatagcaactcagagagtaaattatgag
cggtcttgggagccagtaaaatgggcttgccgagcacctctcaaaactgggcagttgtgt
ccccgcaaagatagggaaaagtgtccatttcatggccccattgttcctcgtgatgaaaca
gggaaacctttgcgaccagaggatgcagcccgggaacaagcagcaagagaacaatatgag
agagaccatccagcctggcaggatccacaacttttagcagaactgaaggcagcaactggt
gtagatttgaaggtagacaagggaagacgtaaaagaaaacataaatatgaaaatttgact
gaccttaaaaagacgacacctaaagaaaggctagctaaaaagatactcagtaagaaggct
gttaggcgccttaatgttgccttagataaggaacacaggtctgctcccaatacctcaagt
gattttagattttcctaa
DBGET
integrated database retrieval system
