Scylla paramamosain (green mud crab): 135108417
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Entry
135108417 CDS
T11531
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 4-like isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135108417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sprm04131
]
135108417
Membrane trafficking [BR:
sprm04131
]
Autophagy
Other autophagy associated proteins
Others
135108417
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_EML_2
WD40_WDHD1_1st
BCAS3_WD40
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_Vps41
WDR55
Beta-prop_IFT140_2nd
CNH
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_IFT140_1st
EIF3I
CFAP251_N
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
135108417
NCBI-ProteinID:
XP_063875447
LinkDB
All DBs
Position
2:3001645..3016001
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AA seq
467 aa
AA seq
DB search
MLTPHHHTIPYHTIRHHHHHHHTTPHRTTTRHHHTTPHHTPYHTTKHHTTPHHHTTVSLA
PRPAQPRKVPPGPSDPRPIPPRLRKTSGTESNTVNFYLQQRQNCDGDPCPILGLCLMQLK
NIMATREKVHSLRFNQDHGCFICCMDSGVRIYNVEPLTEKAHLKESVAGSVGHGEMLHRS
NLIAMVGGGAVPKYADNTVLIYDDCKSQLVLEFTFSVPVLAVRLRKDRLVVVCRRQIHVF
SFPHSPQRLFTCETRDNLLGLCEVSPLPSADRHILCFPAHKLGAVQLVDLLTTETTVSQA
PFTIQAHQSELACLSINREGTLLATASLKGTLIRVWETARRVLLAELRRGSDPATLYCIN
FSSNSEFLCCSSDKGTIHIFALKNTHLNRRSTFSKIGFLGGYMESQWALANFTVPPECAC
ICAFGANSSVYAICVDGTFHKYVYKPDGSCNRESFDVYLDLVADEEF
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaccacaccaccacaccataccataccacaccatacgacaccaccaccaccac
caccacaccacaccacaccgcaccaccaccagacaccaccacaccacaccacaccacaca
ccataccataccacaaaacatcacaccacaccacatcaccacaccacagtatccttggcg
ccccgacctgcccagccccgcaaagtcccgccaggcccctccgacccccgccccatcccg
ccgcgactaaggaagacgtcgggaacggaatcgaacacagtaaacttctaccttcaacag
agacaaaactgcgacggagatccctgccctatcttgggcctatgcctcatgcagcttaag
aatatcatggcaactagagagaaggtccacagcttaagattcaaccaggatcatggatgc
ttcatttgctgtatggactcaggcgttagaatatacaatgtggaaccactcacagaaaaa
gcacacctgaaagaaagtgtggctggaagtgtggggcatggagaaatgttgcaccgctca
aatttgatagcaatggttggaggcggtgcagttccaaaatatgcagataacactgtcctc
atatatgatgattgcaaatcccagctagtcctagagtttactttctcagttccagtattg
gcagtaagacttaggaaagacagattagttgttgtatgtcggcgacagatccacgtgttt
tctttccctcattctcctcaacgactttttacctgtgagacacgggacaatctgttagga
ctttgtgaagtatccccacttccatctgctgacagacatatattgtgcttccctgcccac
aaacttggtgctgtacagttagtggatcttttgacaacggaaaccactgtttctcaagct
ccattcactatacaagcacaccaaagtgagttagcctgtcttagtattaacagagagggt
acactgcttgcaacagcctcactcaaaggcactctgattcgagtatgggagactgctagg
agagtgttactggctgagttgaggagaggctctgacccagcaactctgtattgcataaac
ttcagcagcaatagtgagttcctgtgctgctccagtgacaaaggcacaatccacatattc
gcactgaaaaacactcacttaaatcgacgttctacattttcaaaaataggtttcctgggt
ggttacatggagtcacagtgggccctggcaaacttcactgttccacctgagtgtgcatgc
atatgtgcatttggggccaattcttctgtgtatgcaatctgtgtggatgggactttccat
aagtatgtatacaagccagatggtagttgcaacagagaatcatttgatgtctacctggat
ttggtagcagatgaagagttttga
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