Scylla paramamosain (green mud crab): 135109008
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Entry
135109008 CDS
T11531
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
sprm Scylla paramamosain (green mud crab)
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sprm03041
]
135109008
Spliceosome [BR:
sprm03041
]
Common components
Common spliceosomal components
General mRNP proteins
135109008
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
DUF8400
RBD_DEAH11
Nup35_RRM_2
RRM_10
RRM_7
F07F6_N
Motif
Other DBs
NCBI-GeneID:
135109008
NCBI-ProteinID:
XP_063876055
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All DBs
Position
18:2846109..2863931
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AA seq
572 aa
AA seq
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MCCILVQYNSTLRQGSSLKFAFCRRSCLGWTLRLERHQDATSSSVDSKPKENGHTSSKDR
KDKDRDRERDRDRDKEKDKDRDRDRKDKDKDRDRDRGKDKDRDKDRDKDKDKDKDRDKER
RRRSRSKSRDRDRKKRSRSRDRKKKSRSRSRDRERRRKSRSKSRDRRRKSRSRDRRRSRS
RSRDRRRRSRSRDRRRSRSRDHRRSRSRSKTPKQELSVEERDARTVFCMQLSSRIRSRDL
EDFFSVVGKVNDVRIITDTKTRRSKGIAYVEFCDVESVPLALGLSGQKILGVPIVCQPTQ
AEKNRAASSAAAQDQKVASGPMRLYVGSLHFNITEDMLRGIFEPFGKIDHIQLIMDSETG
RSKGYGFITFHNSDDAKKALEQLNGFELAGRPMKVNHVTERSETQQGSSLLDSDEMERAG
IDLGATGRLQLMAKLAEGTGLQLPAAAANALHMPAQPQQQPAPPIATQCFLLSNMFDPST
ETNPNWSDEIRDDVLEECNKHGGVLHIFVDRQSAQGNVYVKCPTIATAAASVNALHGRWF
AGKMITAAYVPVMSYHSLFPEAMTASQLVFPR
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtgttgtatattggtgcaatataactccacattgcgtcaaggctccagtctaaagttt
gcgttttgcaggcggtcgtgccttggttggaccctacggctagagagacatcaggacgcc
acttcatcctcagtggactccaagcctaaggaaaatggacatacatcttcaaaagacaga
aaagataaagatagagaccgagaaagagatagagacagggacaaggagaaggacaaagac
agagatagagacaggaaggataaagacaaagatagagatagagacaggggtaaggacaaa
gacagagacaaggacagggacaaagacaaagacaaggacaaggacagggacaaagagagg
aggagacggtctcgcagcaaatctcgcgaccgtgaccgcaaaaagagaagcaggtcaagg
gatcgcaagaaaaagtcccggtcgcgctccagagaccgtgagcgcaggaggaaatcacgc
tcgaagtcacgggaccggcgccgcaagtcacgctccagggaccggcgccgcagcaggagc
aggagtcgtgaccggcggcgcaggagtcgtagccgtgaccgtagaaggagccgtagtagg
gaccatcgccgctccaggtccagaagcaaaacccccaaacaggagttgtcggtggaggaa
agggatgcccgaactgtcttctgtatgcagttgtcatcccgtatccgttcccgtgatcta
gaagacttcttctcagtggttgggaaggtcaatgatgtccgcatcatcacagacacaaaa
actcgtagatctaaaggaatcgcttatgttgagttttgtgatgtcgaatccgtgccattg
gctcttggactatcaggacagaagattctcggtgtgcccattgtgtgtcagccaacccag
gctgagaagaatcgtgctgcatcctcagcagctgctcaggaccagaaggttgcgtcaggc
cctatgaggttatatgtcgggtctctgcacttcaacattaccgaagacatgctgaggggt
atctttgagccttttgggaagattgatcatatccagttaataatggactcggaaacagga
cggtccaaaggttatggctttatcacattccacaattcagatgatgccaagaaagcactc
gaacagttgaatggctttgagctggctgggcgtcctatgaaggtgaaccatgtcactgag
cgctcagaaactcagcagggctcctcactccttgattcggatgaaatggaaagagcaggc
atagatttaggtgcaaccggcagacttcaactaatggccaagttagcagagggcacaggt
cttcagctccctgctgcagccgcaaatgccttacacatgcctgcacaaccccagcagcag
cctgcaccacccattgccacgcagtgtttcctgctctccaatatgttcgatccttccacg
gagacgaatccaaattggtctgatgaaattcgtgatgatgtccttgaagaatgcaacaaa
catggaggtgttctacatatatttgtagacagacaatcagcccagggaaatgtgtatgtc
aagtgccctaccatagccactgctgctgcctctgtcaatgccctacatgggaggtggttt
gctggcaaaatgataacagcagcctatgtgccagtgatgagctaccattccctcttcccg
gaggccatgactgcatcccaacttgtgttccctcgatga
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