Scylla paramamosain (green mud crab): 135109227
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Entry
135109227 CDS
T11531
Name
(RefSeq) BUD13 homolog
KO
K13106
pre-mRNA-splicing factor CWC26
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135109227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sprm03041
]
135109227
Spliceosome [BR:
sprm03041
]
Complex B
Other components
RES complex
135109227
Complex C
135109227
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bud13
Nrap_D5
Motif
Other DBs
NCBI-GeneID:
135109227
NCBI-ProteinID:
XP_063876516
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All DBs
Position
18:complement(18253837..18257862)
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AA seq
713 aa
AA seq
DB search
MSSGGAMSQKEYLKKYLSGSDADKKKKKKKKKEKVSSHNKGMRIIEDSVDFKTVPYGYKE
EDDNPTIAEVTYENEKLKIMEEFEANKKWKKMVDKSGEGSWPQSNQEGKDSPRRAGLDSP
SPPRWGKNDSVPQRRVRHDSDSTPPRRAKNDSSPPRRTRHDSSDSDESPPRRSRYSGTPP
HKAKHDSDSSPPGRRHDSESPPKKPDSSPPRRMHHDSQSPPRRTRHDSGTPPWKMRQGST
TPPLDKKADTLKKTHIRNPSPPPARMRKDSDSSLSDDGKKIVSQPSDLPQRQRRHDSSST
SPPPQRIRHDSDNSQPRRHDASRSSSNISSKKSKQNSNSREQDYSDASNSDSSDSMPGKH
ISVYSPPPRKSGKDAKLGPPKRKPQEVKASGAPGLHTSPRRKLYDGDLSPPRRKRHDSDS
SPPRKKKLGSSSSPPKRYDSDASPPRQKRRDSDLSPQRKRHDSDSSPPRKKRLASDSSPP
RQKRYDSDASPTHQKRHDSDSSPVRKKRHSDSDSSPPRARKGKPGLASPPRRKGGDSQPD
GGQMRPERKMTTQEFLSARKHGRLKKDTPEDLARKEREAVLQQQAEEKHQQWKHGVKQVQ
DYKKKVASDLHEMGKAFTRTADDADMNAHLKSIARKEDPMLEYMMKKEAKANNKVSVKPV
FKGSFPPNRLDIRPGYRWDGVDRSSGFEKRWFEHQNNKRAHNEDAYKWSVSDM
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctggtggagcaatgagccagaaggagtacctgaagaagtatctgagtggcagt
gatgcagacaagaagaagaagaagaaaaagaagaaggaaaaagtctcttcacacaacaaa
gggatgcgcatcattgaggattcagttgacttcaaaactgtcccatatggctacaaggag
gaagatgacaatccaaccattgctgaggtgacatatgagaatgagaagctgaagataatg
gaggaatttgaggccaacaagaaatggaagaagatggtggacaaatcaggggaaggttct
tggcctcaaagcaatcaggaggggaaggactcaccaaggagagcaggccttgactctccc
tcacccccaagatgggggaagaacgattcagtgcctcagaggagagtgagacacgattct
gactccacaccaccaagaagagcaaagaatgattcttcaccaccgaggagaactagacac
gactcaagtgactcagatgaatcaccaccaaggaggtccagatactcaggcacacctccc
cataaggccaaacatgactctgactcatcccctccaggcagaaggcatgattctgagtca
cctccaaagaagcctgactctagtccacccaggagaatgcaccatgactctcaatcacca
ccacggaggacaaggcatgactctggcaccccgccctggaagatgcggcaggggtctacc
acaccaccactggataagaaagcagacactctgaaaaagacacatatcaggaacccctct
cctcctcctgccaggatgaggaaggactctgactcatcactctcagatgacggaaagaaa
attgtaagtcagccttcagacttgccacagagacaaaggagacatgactccagcagcact
tcaccaccaccacaaaggataagacatgactcagacaattctcagccaaggagacatgat
gcatccagatcaagttcaaacatttcatccaagaaaagtaagcaaaattcaaactctcgt
gaacaagattattcagatgcatcaaactcagactcctcagactcaatgcctggtaaacac
atctcagtgtactcaccaccaccaaggaagagtggcaaggatgcaaagcttggtccaccc
aagaggaagccacaagaagtgaaggcatctggtgcacctggcctgcacacttcacccaga
aggaagctgtatgatggtgatctatcaccaccaaggaggaagaggcacgattctgattcg
tcacctccaaggaagaagaaactcggatccagttcatccccaccaaagaggtatgactct
gatgcatcaccaccacgccagaaaagacgggactccgacttgtcaccgcagaggaagaga
catgattccgactcatctcccccaagaaagaagagacttgcctcagactcgtctcctccc
aggcagaaaaggtacgactcagatgcttcaccaactcaccagaagagacatgactctgac
tcctcaccagtgagaaagaaaagacacagtgactcagattcatcacctcccagagcgaga
aaaggaaaaccaggtcttgcatccccaccacggaggaagggaggggacagccagcctgat
ggtgggcagatgcgaccagaacgcaagatgaccacccaggagtttttgtcagcacgaaag
catggccgcctgaagaaggacacccctgaggacttagccaggaaggagagggaggctgta
ctgcaacaacaggcagaggagaagcaccagcaatggaagcatggagtgaagcaggtgcag
gactataagaagaaagtagccagtgacttgcatgagatgggcaaggccttcactaggact
gcagatgatgctgacatgaatgcacatctcaagtcaatagctcgtaaggaggaccccatg
ctggaatacatgatgaagaaggaagcaaaagccaataataaggtttctgtcaagccggtc
ttcaagggctccttccccccgaacagactggacatccggcctggctaccgctgggatggg
gtggatcgctccagtggttttgagaaacgttggtttgagcatcagaataacaaaagagct
cacaatgaagatgcatacaaatggagtgtttcagacatgtaa
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