Scylla paramamosain (green mud crab): 135109843
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Entry
135109843 CDS
T11531
Name
(RefSeq) nuclear protein localization protein 4 homolog isoform X1
KO
K14015
nuclear protein localization protein 4
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135109843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sprm03009
]
135109843
Ribosome biogenesis [BR:
sprm03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
135109843
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NPL4
zf-NPL4
UN_NPL4
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
135109843
NCBI-ProteinID:
XP_063877667
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Position
19:20173069..20185480
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AA seq
663 aa
AA seq
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MEIISTGPYRSRHSCQIIRVQSADGTKRVEVKPTDTTKTLYEKVYEIHNLSSFDFTLTTS
RDIKSEIASSSRKTLKGCKLNHGDMLFLHKLDTEGKNGSSIKSKENEIFGHPVAGSSSSS
NTSSRSLPSTSKNAMKSSPSTSTSSGTSQQIASRIKSMVEEDEVDRILAKEDGRIPRKQN
PQLCRHGSTNKCVHCIPLDPWDENYLKEQNIKHLSFTSYLRKLTSGVDKGKFVSLDDINC
RIKAGCKDHPPWPKGICSKCQPSAITLNRQSYRHVDNVMFENPNLVERFLNYWRVTGHQR
LGFLYGRYEPHLDVPLGIKATVVAVYEPPQEGTRDHVKLLPDPRKDLVDEIAKGLGLTCV
GWIFTDLVPLDANNGTVRYLRHAGTYFLSAHEVITAAHLQHLHPNPCRLSPEGRFGSKFV
TVIVTGDQNNQVHMEGYQVSNQCQSVVRDKCLIPTKDAPELAYIKESTAEQYVPDVYFKE
KDQYNNEVVRLGRPLPVEYLLLDCPVSTPNEPLYTFAVNEASFPVANRMVEGHLQDFTTL
AAYLKKFTDDQFLEAMSDLHVLIYIAAMDMLPLREYIGPLLEAVKTRNRAAALEWKQSGH
WATVEQLVMASGPESLAGARGADVVGVGSSTQPSAAATSWTCQHCTFINQTATESCDMCH
LPK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggaaataatatccactggtccttacagaagccgtcattcttgccagatcatccgtgtc
cagtcagcagatggcactaagagagtggaggtgaaacccacagacaccaccaagacctta
tatgagaaagtctatgaaatacacaacctctcctcctttgacttcactctcaccacctcc
cgagacattaagtctgagattgcctcctccagccgtaagacactcaagggatgcaagctg
aaccatggtgacatgcttttcctgcacaagcttgacactgaaggaaagaatggcagcagt
attaagagtaaggagaatgagatctttggccacccagttgctggcagcagcagcagcagc
aacaccagcagcagaagcctccccagcaccagcaagaatgcgatgaagagcagtccatcc
acatccacatcctcaggcacctcccagcagatagcctccagaatcaagagtatggtggag
gaggatgaggtggaccgcatcctggccaaggaagatggccgcatccccaggaaacagaac
ccccagttgtgtcggcatgggtcaaccaataagtgtgttcattgcattcccctcgaccct
tgggatgagaattacctgaaggagcaaaacatcaagcacctttccttcacctcataccta
cggaagctaacatcaggtgtggacaagggaaagtttgtcagcttagatgacatcaactgc
agaattaaggctggatgtaaagaccatccgccatggcctaagggcatctgctccaagtgc
cagccatcagccatcaccctcaaccgtcagtcttaccgtcacgtggacaatgtcatgttt
gaaaaccctaacctggtggagcgcttcctcaactactggcgggtgacaggccaccaacgc
ctcgggttcctgtatggccggtatgagccacacctggacgtcccactgggcatcaaggca
acagtggtggcagtgtatgagccaccacaggagggcaccagagaccatgtcaagctgcta
cctgatcccagaaaggatctggtggatgagattgcaaaggggttgggactgacctgtgtg
ggctggatcttcactgatctagtgccactcgatgccaacaatggcacagtgcggtatctg
aggcatgctggcacctacttcctctctgcccacgaggtgatcaccgctgcccacctccaa
cacctccacccaaacccttgcagactgtccccagagggaaggtttggctccaagtttgtc
acagtgatagttaccggtgaccagaataaccaggtgcacatggaggggtaccaggtaagc
aaccagtgccagtctgtggtgagggacaagtgcctcatacccaccaaggatgcccctgag
ctggcctacatcaaggaatccactgctgaacagtacgtccccgatgtgtacttcaaggag
aaggaccagtacaacaatgaagttgtacgtttaggaagacctttacctgtagaatacctg
ctcttagattgcccagtctcaactcctaatgagcctctctatacatttgctgtgaatgaa
gccagttttcctgtggcaaacaggatggtggagggtcacctgcaggacttcactacgcta
gcagcgtatctcaagaagttcactgatgaccagttcttggaggccatgtcagacttgcat
gtccttatatacattgctgcgatggacatgctacctctcagggagtacattggaccatta
cttgaagccgtcaagacccgcaaccgagccgcagcactggagtggaagcagtcgggccac
tgggcaacagtagagcagttggtgatggcctcgggaccagagagtctggctggtgcacgg
ggggctgatgtggtaggggtggggtccagcacgcagccctcggcggcggccacctcctgg
acgtgccagcattgcacctttattaaccagacagcaactgagagctgtgatatgtgccac
cttcctaagtga
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