Scylla paramamosain (green mud crab): 135110335
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Entry
135110335 CDS
T11531
Name
(RefSeq) transcription activator BRG1-like isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135110335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sprm03021
]
135110335
03036 Chromosome and associated proteins [BR:
sprm03036
]
135110335
Transcription machinery [BR:
sprm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135110335
Chromosome and associated proteins [BR:
sprm03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
135110335
Chromatin remodeling factors
BAF complex
135110335
PBAF complex
135110335
GBAF(ncBAF) complex
135110335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
HSA
SnAC
ResIII
QLQ
BRK
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
135110335
NCBI-ProteinID:
XP_063878637
LinkDB
All DBs
Position
20:12362387..12400405
Genome browser
AA seq
1627 aa
AA seq
DB search
MSAPSPSPGSAASPMGPPQQSLSPMPPPQATSPAVGPPQAPSPMGPPQAPSPMGPPVMSP
GPAQQGPPPGPGMSPQSGPGPHHAYPQGPQGGQGWQQPPGPYLNNYQSQPSQGQQGPPSM
GPGSHHPPQGPPGAPSGSTLAPPSSGAGGPNGPSPSGGSFQQENLHALQKAINTMEDKGM
QNDPRYTDLVNMRAKYGTINMGPPPPTGTTTAGGTPGPSVPPGGPAYGPPGAPGGPEGQR
TGLLNANQMHQLRAQIMAYRCIARNQPVPPQVTQLAQGRRPEQDPNRPMGPTMTGPAGPP
SGPPSGPPPGPPTGPPSGPPAGPATGPPSGPQPGPPAGPPGPPGPPGPPGPTTMQYPRHP
GPVPVVRPPYNGTGPSQTPPPPVSVMSSQPGTTGPLHGTTPRPQVPQAPTATTPVPAGGK
TSRVTPVTKPSGVDPLILLQERENRLAARIAHRIDELSALPATMADDLKVKAQIELRALR
LLNFQRQLRAEVVGCNRKDTTLETAINIKAYKRTKRQGLREARITEKLEKQQKLEAERKK
RQKHQEYLNAVLQHGRELKEFHRQNTLKINKLNKALLMHHMNAEREKQKEQERIEKERLR
RLMLEDEEGYRKLIDEKKDKRLAYLLTQTDEFIANLTEMVKAHKEDQRLKYKEERKKVRE
ERKRAREAVSEAGEDGEKIIRIPVMESATGNIMSGLQAPTAETLEAFLAANPGWEVLPEE
DSSESSDDDDHKEEEEKKEDGENECKDELKNEKEVVGNPKEVLKKAKVEDDEYKNISGEK
NYYSIAHTVKETVTQQASIMVNGQLKEYQVKGLEWLVSLYNNNLNGILADEMGLGKTIQT
IALLTYLIEHKKNNGPYLIIVPLSTISNWALEFEKWAPTVQIVTYKGSPQVRRIVQNQMR
ATKLNVLLTTYEYIIKDKAVLSKLRWKYMIIDEGHRMKNHHCKLTQTLNTFYNAPHRLLL
TGTPLQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGEKVELNEEETILIIRRLH
KVLRPFLLRRLKREVEAQLPDKVEYIIKCEMSGLQHVLYRSMQTRGVMLCAEDKKGQKSN
TKALMNTIMQLRKLCNHPFMFQHIEEAYCNHTGFAGGIVQGPDLFRASGKFELLDRILPK
LYATDHRVLLFCQMTQLMTIMEDYLMYKGFKYLRLDGMTKSEDRGELLRLFNTSREYFIF
LLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQKNEVRVLRLMTVNTVEE
RILAAARYKLNMDEKVIQAGMFDQKSTGSDRRQFLQAILSNDTEEEEEEDEAPDDETINQ
MIARGEEEFEQFQKIDEIRRKESDRARLMAEDELPEWMLKEEESEELEEEEPEELGDRRA
RSKKEVDYTDSLTEKEWLRAIGAVEDDGKEAMEDDEEEVAVTKTKRGSKGKRKRQDDLDN
DDDPKPKKRGRPAREKPAPKNKRLIRQMKRLMDIVIKYEDSDGRVLSEPFMKLPSRRELP
DYYGVIKRPMDIVKIQSKIEEGRYEDLNDLESDFMLLCRNAQEYNEEASIIYEDSIVMQS
VFLNARERIETEADNLPEEDFEEEEEEEEDEDTRPKKSKKSKGEKGRGRRKRVKYADDSD
DDDDDDD
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctccaagccccagtcctggaagtgctgcatcccccatggggccgccccagcag
tccctatctcccatgcccccaccccaggccacctccccagctgtaggtcctcctcaggcc
ccttctcccatggggcctccccaggcaccctcccccatgggacctccagtcatgtcccct
ggccctgcccagcaagggcctcctcctggacctggcatgtcacctcagagtggtcctggc
ccccaccatgcctacccccagggaccacagggaggacagggatggcagcagcctcctgga
ccctacctcaataactaccagtcccagccatcccaagggcagcagggtcccccctccatg
gggcctggcagccaccacccaccacagggcccaccaggagcaccctcagggagcaccttg
gcaccccccagcagtggtgctggtggccccaatggtcctagccccagcggcggctccttc
cagcaggagaacctccacgccctgcagaaggccatcaacaccatggaggacaagggcatg
cagaatgaccctcgttacactgacttggtcaacatgagggccaagtatggcaccatcaac
atggggccaccgccccccacaggcaccaccacagctgggggtactcctggcccttcagta
ccccctggtgggccagcctatggaccccctggtgctcctggaggaccagagggacagagg
acaggtcttctgaatgccaatcagatgcaccagctacgtgcacagatcatggcatatcgc
tgcattgctcgcaaccagccagtgccgccccaggtgacccagctggcccagggcaggcgg
cctgaacaggaccccaacagacccatgggacccactatgactggacctgctgggcctcct
tcaggacctccgagtgggcctcctccaggtcctcccactggcccccccagtggaccacca
gcagggcctgccactggacccccatcaggtcctcaaccagggcccccagctggtcctcct
ggacctccagggcccccaggacccccaggccccacaaccatgcaataccccagacaccca
ggtcctgtacctgtggtgaggccaccctacaatggcactggaccatcccaaaccccacct
ccgcccgtcagtgtcatgagctcccagccaggcaccacaggacccctgcacggcaccaca
ccccgcccccaggtcccacaagccccaacagccaccactccagtgcctgctggagggaag
accagccgtgtcaccccagtcaccaagccttcaggagtggatcctctcattctgctgcag
gagagagaaaacaggttggctgcacgcattgcgcatcgtatcgacgagttgtcagcactg
cctgccaccatggctgacgacctcaaagttaaggcacagattgagctgagggcattgcgt
ctcctcaacttccagcggcagctgagggcagaggtggtgggctgcaatcgcaaggacacc
acactggagacggccatcaacatcaaggcgtacaaacgcaccaagcgtcagggactgcga
gaagcgcgtatcaccgagaagctggagaagcaacagaaactggaggcggagcgcaagaag
cgacagaagcaccaggagtacctcaatgcagtcctgcagcatggccgggaactcaaggag
ttccaccggcaaaacacactcaagatcaacaagctgaacaaggccctgctgatgcaccac
atgaatgccgagcgagagaagcagaaggaacaggaacgcatcgagaaggagcggttacgt
cgtctcatgctggaggatgaggaggggtaccgcaagctgatcgacgagaagaaggacaaa
cgactggcctacctcctcacccagactgacgagttcattgccaacctgacagagatggtg
aaggcacacaaagaggaccaacgactcaagtacaaggaggagcgcaagaaagtgcgtgag
gagagaaagcgagcacgtgaggctgtgtcagaggccggggaggatggggagaagataatc
cgcatccctgtcatggagtcagccactgggaacatcatgagtggcctgcaggcacccaca
gcagagaccctggaggccttccttgccgccaacccgggctgggaggtgctgcctgaggag
gattcttcagagtcttccgatgatgatgaccacaaggaggaggaggagaagaaggaagac
ggcgagaatgaatgtaaggatgaattgaagaacgagaaggaggtggtgggcaacccgaag
gaggtattgaaaaaggccaaggtggaggatgacgagtacaagaatatttctggagagaag
aattactactccatcgcccacacggtgaaggagactgtgacccagcaggcaagcatcatg
gtcaacggccagctcaaggagtaccaggtcaagggtcttgagtggctggtgtctctgtac
aacaacaacctgaatggcatcctggctgacgagatggggctgggcaagaccatccagacc
attgccctgctcacctacctcatcgagcacaagaagaacaacggcccatacctcatcatt
gtgcccctctctaccatctccaactgggcacttgagtttgagaaatgggcccccactgta
cagattgtcacttacaaagggtcgccacaagtgcgtcgcattgtgcagaaccagatgcgt
gccaccaagctgaacgtgctgctcaccacctatgaatacatcatcaaggacaaggcggtg
ctgtccaagctgaggtggaagtacatgatcattgacgagggtcaccgaatgaagaaccac
cactgcaagctgacccagacactgaacaccttctacaacgctccacaccgcctgctgctc
accggcacaccgctgcagaacaagctgccagagttgtgggctctcctcaacttcctgctg
ccctccatcttcaagtcatgctccacctttgagcagtggttcaacgctccctttgccacc
actggagaaaaggtggagctcaacgaggaggagaccatcttgatcatccgtcgcctgcac
aaagtcttgcgtcccttcttgctgcgcagactgaagagggaggtggaggcacagctgcca
gacaaggttgagtacatcatcaagtgtgagatgtctgggctgcagcacgtgctgtaccgc
tccatgcagacccgcggcgtgatgctgtgtgctgaggacaagaagggccagaagagcaac
acaaaggcacttatgaacaccatcatgcagctgcgaaagttgtgtaaccatcccttcatg
ttccagcacattgaagaggcctactgcaaccacactggctttgcaggaggcattgtgcag
gggcctgatctgttccgtgcatcaggcaagtttgagctgctggaccgcatcctgcccaag
ctgtacgccacagaccaccgtgtgctgctcttctgtcagatgacccagctcatgaccatc
atggaggactacctcatgtataaaggattcaagtatctcagactggatggtatgacaaag
tctgaagaccgtggggagctgctgcgtctcttcaacacttcccgcgagtacttcatcttc
ctgctgtcaactcgtgctggtggtctgggcctcaacctgcagtcagccgacactgtcatc
atctttgactctgattggaacccccaccaggatctgcaggcccaggatcgtgcccatcgt
attggacagaagaatgaggtgcgagtgttgcgactgatgacagttaacacagtggaggag
agaatccttgctgctgcacgttacaagctgaacatggatgagaaggttatccaggctggt
atgtttgaccagaagtccactggctcagaccgacgccagtttctgcaggccattctctcc
aacgacactgaggaggaggaggaggaggatgaagcgccggatgacgagactatcaaccag
atgatagcgcgtggcgaggaggagtttgaacagttccagaagattgatgagatacggcgg
aaggagtcagaccgggcaagacttatggctgaggatgagctgcctgagtggatgttgaag
gaagaggagtcggaggagctagaggaggaggaaccagaagagctgggtgatcgacgggca
aggtcaaagaaggaggtggactacactgacagcctcactgagaaggagtggctgagagct
attggggcagttgaggatgatgggaaggaggcaatggaagatgacgaggaggaggtggca
gtgaccaagacaaagcgtggctccaagggcaaacgcaagcggcaggatgacctggacaat
gatgacgacccgaagcctaagaagagaggtcgcccagcgcgtgagaaaccagcaccaaag
aacaagagactcattcggcagatgaagagactaatggacatagttatcaaatacgaggat
agtgatggccgtgtgctgagtgagccgttcatgaagctaccgtctcgtagggagttgcca
gactactatggggtcattaagcgaccaatggacatcgtcaaaatacagtctaaaattgaa
gagggtcggtacgaagacctcaacgacctggagagtgacttcatgttgctgtgccgcaat
gcccaggagtacaacgaggaagcatccatcatctacgaggactctattgtcatgcagagc
gtcttcctcaatgctcgggaacgcattgagactgaggcagacaacttgcctgaagaagat
tttgaagaagaggaagaggaggaggaagatgaagacacacgtccaaagaagagcaaaaag
agtaaaggagagaagggcagaggccgtaggaaaagggtcaagtatgcagacgactcagat
gacgacgatgatgacgatgactga
DBGET
integrated database retrieval system
