Scylla paramamosain (green mud crab): 135110565
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Entry
135110565 CDS
T11531
Name
(RefSeq) tetratricopeptide repeat protein 37-like
KO
K12600
superkiller protein 3
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135110565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sprm03019
]
135110565
Messenger RNA biogenesis [BR:
sprm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
135110565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_17
TPR_11
TPR_12
TPR_16
TPR_CcmH_CycH
ARM_TT21_C
TPR_7
TPR_9
ARM_TT21
ANAPC3
ARM_TT21_2nd
TPR_Slam
TPR_15
ARM_TT21_N
TPR_10
Fis1_TPR_N
Motif
Other DBs
NCBI-GeneID:
135110565
NCBI-ProteinID:
XP_063879081
LinkDB
All DBs
Position
20:19228898..19247027
Genome browser
AA seq
1341 aa
AA seq
DB search
MSEVRNALKEAKKAMKDNDFEAVSKYCKIALKHDRKNYNALLFFGRACQELGKYEDSKKA
LMMATQIEPDSPVAWQGLAVLCEKQPHVSTKDEYIIIYTRLIDFVKDDEEKVDSTFRKLA
KLHLDNDDPMGAAGILRTLVDRLTGEKRITEAWRSLAQTLTAVTNLPKEDIPKLQEALEH
SLNDSVLGENETNYQNYLRLLYRTGQRTKLVLAAQNMAKIFPTYLPLEWICRIFVELNAY
PCEEQEFPLSQEETNVYITRLLSINKTSPWGNLAQGMIYSQEGRLVEAKAHLRLGADNVK
NNLIGWELLRSIQERSSDWPGVETSCRKSLAILSSDNTPTIPRGEDPQAYGTQLRLMQAR
ALVHMGHKNHLKQAVTMLEEFYKTDIDCGLLLVRSRIKLLEFDIASEVLKELEDIFGSSY
QLKFLSATLLHAEGEKQQAKQLLEEIVMEEPGFAEGHLELGQIYFETGEMKHAQICCMRA
GKLNPKLARAFLYLGHFFRHEDNMDKALKCYEKALSLSPSDDDVGAALSDLYRILGKYEA
NIQLLQRVTREGGRASCGWAWLRLGLHHLALQNHDPAIQAFQCALTINPDDGPSYECLGD
AYLARGAHTAALKVFTYASQLNVTAVYPRYQIAHIKQIVGENLQSVEDFEAVLKWEPMRP
VRVVSLVGLAEALLASARKHQEQFFMSNVKDACTQAIFCLIRAASMKPDCSCIWKLMGDA
CLMLYPMPPSLAPFTLPAKLINREIQDLDEVVEVTKLQVLQMGTRCYGLALQGTPEDALL
WHDLGLSTYLQARVQEGSSEGSKEEATIRDLLSHSIQALKKGLTLDPSSSKMWSSLGIVA
SHKWSGNNALAQHSLIKSCLCQPSAVSWTNLGAFYLSHGETQLAHEAFSQAQNLDPSYVT
CWVGQALVAESIGHYEMFDLFRHTTLLGIHLESCIGYSHHVTDLACDRTKQGQRSTEDTL
KQALPPATDCTMFYTRSVEEDAIGLNMAGLTLEMMGLYESATRAYEMALSSLKQTPDDSG
NVLDGVRANLGRTLTAQGKAEEAMVHFSAIKQPDYFTQCGLALASLKAGKFEEAYNGYTA
ALHWLAPDDSQKSHILVALASLQYKFQNSEEAKKLLFQGSQLQGASLRGLLVLAALGLVL
GDAVLTNAALAELTPHQHNKEHLHNIAFLRAAEATAKGNIKEAKCILSRTIHQHPSSAPL
WQALAQHLLTHLPSTKQSRGANIITVTTAAAACASAAAKLTQSAGLHKTIAQDAVTSVLA
TIELERAKKSKEGVSLRQAQRAVLMCPGSPEAWAMFLAAQVVSGRAQSKNICQLAHIWSQ
KASPGVSSWLKTLATNIENVA
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagtcagaaatgcattaaaggaggccaaaaaggccatgaaggataatgacttc
gaagctgtctccaaatactgtaagattgctttgaaacatgaccgtaaaaactacaatgct
ttgctgttctttggccgagcatgtcaggagcttggcaagtatgaggattccaagaaggcc
cttatgatggcaacacagatagagccagacagtcctgtagcttggcaaggattggctgtg
ctctgtgagaagcagccacatgtttccacaaaggacgagtatatcattatctacactaga
ctgattgactttgtgaaggatgatgaagaaaaagtggacagcactttccgtaagttggcc
aaactgcacctagataatgatgaccccatgggtgcagctggcatcctcagaacgctggtg
gacaggcttacaggagagaagaggataacagaagcatggcgaagtcttgcacaaaccctc
acagcagtcactaatttacccaaagaagatattccaaagctacaagaagccttagaacac
agcctgaatgattctgtgttaggtgagaatgaaaccaactaccagaactacttgcggctt
ctgtaccgcactggccagcggaccaagctagtgttggcagcccagaacatggccaagatt
tttcccacctacctgcctttggagtggatctgccgcatatttgtagagttgaatgcttac
ccgtgtgaagaacaggagttcccacttagccaagaggaaaccaatgtgtatataacaaga
ctgctgagcatcaataagacctccccttggggcaatctggcacaaggaatgatttacagc
caagaaggcaggctggtggaggccaaggcacacctgaggctcggagctgacaatgttaag
aacaatctgatagggtgggagttgttgcgttccatccaagagaggagcagtgactggcct
ggagttgaaacatcctgtaggaaatctctggccatcctctctagtgacaatacccctaca
atacctagaggagaagatccccaagcctatgggactcagctgaggttaatgcaagcccgg
gcactggtgcacatgggtcacaagaaccacctgaagcaggcagtcaccatgctagaggag
ttttacaaaactgatatagactgtgggctgctgttagtcagatcaagaataaagctcctg
gagtttgacatagccagtgaagttctgaaggagctggaagacatctttgggtcaagttat
cagctcaaattcctctcagccaccttgctgcatgctgagggagagaagcagcaggccaag
cagctactggaggagatagtgatggaagagcctggatttgctgagggtcacctggagttg
ggtcagatctactttgagactggagagatgaagcatgctcagatctgctgcatgagagca
gggaaattgaaccctaagttggcccgtgcctttttgtacctgggccatttcttccgccac
gaggacaacatggataaggctcttaagtgctatgagaaggctctgtccctcagcccaagt
gatgatgatgttggagcagctttgtcagatctttacaggatcttaggaaaatacgaagca
aatatccaacttctgcaacgagtgacaagggaaggtgggcgagcctcatgtggctgggcg
tggctcaggttggggctgcaccacttggccctccagaaccatgatccagccatccaagcc
tttcagtgtgccctcaccatcaatccagatgatggtcctagttatgagtgccttggagat
gcatacctggcccggggtgctcacactgcagccctcaaagtcttcacatatgcctctcaa
ctcaatgttactgctgtctacccacgctaccagattgctcacatcaaacaaattgtggga
gagaacctgcagtctgtggaggactttgaggccgtgctgaaatgggagcccatgagacca
gtgagagttgtgtctcttgtgggattggcagaggccctcctagctagtgccagaaagcac
caggaacagttcttcatgtccaatgtcaaggatgcatgtacccaagccattttctgtctt
ataagggcagcaagcatgaagccagactgctcctgcatctggaagctcatgggagatgcc
tgcttaatgttgtacccaatgccaccttcccttgctccctttacacttcctgccaagttg
atcaacagagagatacaagacctggatgaagtagtggaggtaaccaagttacaggttcta
cagatgggtaccaggtgctatggtctggccctacaggggactccagaagatgcattgctg
tggcatgacttgggactgagtacctatctgcaggcgagagtccaggagggcagctcagaa
ggttccaaagaggaggccaccatcagggacctgctgagccactccatccaggcccttaag
aaaggcctcacccttgacccttctagtagcaaaatgtggagttcccttggcattgtggcc
tcccacaaatggtctggcaacaatgcactggcacagcattccctcatcaagtcatgcctc
tgccagccatctgctgtatcatggaccaatcttggagccttctacctgagccatggtgag
actcagctggctcacgaggctttctctcaggcacagaacctggatccttcatatgtcacc
tgctgggtgggccaggcactggtggctgaaagcattggtcactatgaaatgtttgatttg
ttccgccacaccaccttactgggcatccacctggagagctgcataggatattcccaccat
gtaacagacctggcttgtgaccgtactaagcagggtcagcggtctacagaggacactctt
aagcaggcactacccccagccactgactgcactatgttctatacccggtcagtggaggag
gatgccattggactcaacatggcaggcttaaccctggagatgatgggactctatgagtca
gcaacaagagcatatgaaatggctctcagttccttgaagcaaacaccggatgactcaggg
aatgtgttggatggagtgcgtgccaacttaggtcgcaccctcactgcccagggcaaagcc
gaagaggccatggtgcacttctcagccatcaagcaaccagactactttactcagtgtggt
cttgctctggccagcttaaaagcgggaaagtttgaagaggcatataatgggtacacagct
gccctccactggctagctcctgatgattcccagaaatctcacatccttgttgccttggca
tcattgcagtacaagttccagaattcagaagaagctaaaaagttgcttttccaggggtct
cagctacagggggcttcactgcggggtctgctggtcttggcagccttgggcttggtgctg
ggggatgctgtgctgactaatgctgcgttagctgagctcactccacatcaacacaacaag
gaacacctccacaacatagcattcttgagggctgctgaggcaacagcaaaaggcaacata
aaggaggccaaatgtatactgagtcgaaccatccatcagcacccatccagtgcacctcta
tggcaggcattggctcagcaccttctcactcacctacccagcaccaagcagtcaaggggt
gccaacatcattactgtcaccactgctgctgcagcctgtgcctcagcagcagccaagcta
acacaatcagcaggattgcataaaaccattgctcaggatgctgtgacaagtgtactagcc
actattgagctggagagggccaagaagagcaaggagggagtaagtctgcgacaggcccaa
cgtgctgtcctcatgtgtccaggctcccctgaggcatgggccatgttccttgctgcccaa
gttgtatcaggacgtgcacaaagcaagaacatctgtcagctggctcacatatggtctcag
aaggcatctccaggtgtttcttcttggctcaagactcttgcaacgaatatagaaaatgtt
gcataa
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