Scylla paramamosain (green mud crab): 135111418
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Entry
135111418 CDS
T11531
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
135111418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sprm03036
]
135111418
03400 DNA repair and recombination proteins [BR:
sprm03400
]
135111418
Chromosome and associated proteins [BR:
sprm03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
135111418
DNA repair and recombination proteins [BR:
sprm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
135111418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
Motif
Other DBs
NCBI-GeneID:
135111418
NCBI-ProteinID:
XP_063880762
LinkDB
All DBs
Position
2:complement(18348776..18424081)
Genome browser
AA seq
1712 aa
AA seq
DB search
MECSAVTLPLEPRSSSADFAENPLEEKNIHAKNEVVTFMDDGANHENVINEVQNQKEDEN
NQVHAGFFADDPQRQGYNTTGSNGGSSQHSSVDQTSRDLQAQEDELRELGIDVVDQVSLE
RRVEAAVDKAVATHARKQKLQILKKEIKDIRMESKSAENKMLALKNRLTGMQQRVVDPRM
YFRVEEDMNSKAQQLKTLREREKFLEQKLASAETNAEELDDLELEEGEILEEEEETQEID
MKDNSEREKLIREGQMTPFGTTSNASKTVSFPRPSKIYTEKHLSVGKKDSTLKSKTEIIS
CGEMTLFGTILEPADTSNRLSDTQSGAIGKFEQYLQDQFSRQKQHNGSSKDVSCKKSSGD
PSYGFPKKRRKKLKEYVGVYDNGNDNHDNLNFSKNQGKAKKSNKKDPLKKHILHPKKRRT
EKVSLTVTSTLESDQLKLPPRRLLSEHVSFEGSDSEYSDNQERDSDYFPSDYDCADVIES
ENDENFESENIGEKRKYILKIRNKKKVEGSDEMSSEDDVPKVKQKNRKSKDDGNIADYMK
RVETWKKERLKKKQDKILKGEDLDSEEEEEQGYEQFTGGYKVPLLVWNKLYKYQKTCVRW
LWELHSQGCGGILGDEMGLGKTIQIISFLVGLSYSGLSYRRQRWNGLGPTLVVCPATVLH
QWVKEFHIWWPPFRVAVLHESGSFTGTRPALISNINSHSGILVTSYTGVRDQLETLLQYD
WHYIILDEGHKIRNPEAQITVALKRFQTPHRLILSGSPIQNSLKELWSLFDFVFPGKLGT
LPVFLQQFAVPITQGGYANATKLEVQTAFKCASMLRDTINPFLLRRMKNDVRSHLSLPDK
NEQVLFCSLSDEQRKIYSEYIAGDQVKAIMGGRAKVFVGLINLRKICNHPDLYTGGPVGE
NTTWNSGLQPELRYGWWSRSGKMHVLRSILQLWSSQGHRVLLFTQSRQMMCILEKFLMDE
SYSYLKMDGTTTVASRQPLINKFNSDPSYFVFLLTTRVGGLGVNLTGADRVVIYDPDWNP
STDSQARERAWRIGQLRHVTIYRLLMAGTIEEKIYHRQIFKQFLTNRVLKDPKQQRFFKT
NDLYELFSLTEGEKEKTESSAIFAGTGSEIKLGVKKKQSEQSEKKKTDPHRNRETCDKVE
VSSLPKGRVFTNNPMSKTQNKSHEKKKSIAMSVENVDKNSAQVGLNQVEKMKELAKLISK
KIGSTKKLQDEPIDSIHLDSSHKEEGNTDDKSLDSSLIGEGKDDDKTSSNILPNNDMEVK
MSENNVDEEKPGTFAVKDFIISKPSAVENIADMKLVAETETSCTKGLTFTSLSLSCEEVS
HHQGKEKRSTKLANVDKCLEKAEEKSKPSGSILFKALSIGNYERERNKAQEMHSDKFEIN
SDLNTEQIRNSNKHKKKYKDKSKEKHKEHHKKGKKFEGMRIEYLAKKRKYKKTEEEEMEE
KELSKSQDQYVLEKLFRKSGIHGALSHDAIMNNSDPDYLLVEGEAERVAKEALKAVRASR
ARCFRPQPIESKQLSLGKSTLKFGKNKSQIFKEVSYVGGSKMKDGSHKEQKIPMFSGGFE
EEIKDNTDVKDGGESKLNTPLCNEQGVGSSGILSSSQLLSRMRQRNKGIALDSENEEEDD
YDPDYPSTAPVDEESLEPEIQENIDLLADIRNFVAFQAEIDGQATTQEIISRFQERLPAS
QTPFFKALLTQICDFHRDNSGRGIWSLKGEFR
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atggagtgttcagctgttactctgcccttggagccaagaagcagttctgcagactttgct
gaaaatcctttagaagaaaaaaatatacatgcaaaaaatgaggttgtaactttcatggat
gatggtgcaaatcatgaaaatgttataaatgaagttcagaatcaaaaggaagatgaaaat
aatcaagtacatgcaggtttctttgctgatgatccacaaaggcaaggatataacacaact
gggagcaatggaggctcatcacaacacagctctgttgatcaaacctcacgggaccttcaa
gcccaggaggatgagctgcgggagttgggcattgatgtggtggaccaagtatcactggag
cgccgtgttgaagcagctgttgataaagcagttgcaacacatgctcgcaaacagaagctg
cagattctcaaaaaggaaattaaagatatcagaatggagagtaagagtgcagaaaacaag
atgctggcactgaagaatagattaacaggtatgcagcagcgtgttgtggatcctcgtatg
tattttagggttgaggaagatatgaacagtaaagctcagcaattgaagacactcagggaa
cgagaaaaatttctggaacagaaactagcatctgctgagacgaatgcagaagagcttgat
gatttagagttagaagagggagaaattttagaggaagaagaagaaacccaagaaatagac
atgaaggataatagtgaaagagaaaagcttattcgtgaagggcaaatgacaccatttggg
accacctccaatgctagtaagactgtttcgttcccaaggccaagcaagatttacacagaa
aagcatttatctgtggggaaaaaggattctactttgaaatctaaaacagaaattataagc
tgtggagaaatgacactatttggcaccatcttggaaccagctgacacctcaaacaggctt
tcagatacacagtctggggctattggaaagtttgaacagtatcttcaagatcagttcagc
cgacaaaaacagcacaatggatcaagtaaagatgtttcttgtaaaaagtcttctggtgac
cccagctatggttttccaaagaaaagaaggaagaagctgaaggagtacgttggagtatat
gataatggaaatgacaaccatgataatctgaatttttctaaaaaccaagggaaagcaaag
aaatccaacaaaaaagatcctctcaaaaaacacattcttcatcctaagaaaagaaggact
gaaaaagttagtcttactgtcacaagtacattagaatcagatcagttaaaacttcctccg
cgtaggttgttatcagaacatgtgagctttgaaggaagtgattctgaatattcagataat
caagagagagactcagactattttccatctgattatgactgtgctgatgtgatagaaagt
gaaaatgatgagaactttgaaagtgaaaatattggtgagaaaagaaaatatattttgaaa
ataagaaacaagaagaaagtagaaggtagtgatgaaatgtcatctgaagatgatgttccc
aaggtgaaacagaagaatagaaaatcaaaagatgatggaaacatagctgattatatgaaa
agagttgaaacttggaaaaaagaaaggttgaaaaaaaagcaagataaaattctcaaagga
gaagacctagattcagaagaggaagaggagcaaggctatgagcagtttacaggtggctac
aaggtgccactactagtatggaataaactctacaaataccagaaaacatgtgtgaggtgg
ctgtgggaactgcatagtcaaggatgtggaggcattttgggagatgagatgggccttggc
aaaactatccagattatatccttcttggtggggctttcctactcaggtctttcttaccga
agacagaggtggaatggtttaggaccaacattggtggtgtgtcctgccactgttctccat
cagtgggtgaaagagtttcacatatggtggcctcccttcagagtggctgttctacatgaa
tctggctcatttactggtacaagacctgcccttatcagcaacatcaatagccatagtggg
atattagttacctcctacactggtgttcgggaccagcttgaaacattgcttcagtatgac
tggcactacattattcttgatgaaggtcacaaaatccgcaacccagaagctcaaatcaca
gttgcacttaagagatttcaaaccccacacagactgattctttctggctcaccaatacag
aatagcttaaaggaactgtggtcactttttgattttgtgttccctgggaagctggggaca
ttaccagttttcttgcaacagtttgcagtgcccattacacagggtggttatgcaaatgcc
accaaactggaggtccagacagcattcaagtgtgcttctatgcttcgagataccatcaac
cctttcctgttgcgcagaatgaagaatgatgtaaggagtcatctaagtttgcctgataag
aatgaacaggtcctgttttgcagtttgagtgatgaacagcgtaaaatctactcagagtat
attgctggtgaccaagtgaaagccatcatgggaggtcgagcaaaggtatttgttggatta
atcaatcttcggaagatatgcaaccatccagatttatatacaggaggccctgttggtgaa
aacactacctggaactctggccttcagccagagttgagatacggatggtggagccgctca
ggcaaaatgcatgttctgcgttccattctacagctttggtcttctcagggtcatagagtc
ttactcttcacacagtctcgccagatgatgtgtattcttgaaaagttcctgatggatgaa
agttattcctatctcaaaatggatggaactacaacagtggcctcccgccagcctttgatt
aacaagttcaacagtgatccttcctactttgtgtttcttctcaccacccgcgttggaggc
cttggagtaaatttgactggtgctgacagagttgtgatatatgatcctgattggaatccc
tcaacggattctcaggccagggagagggcatggaggattggccagttgcgtcatgtaact
atttacaggctactaatggctggtacaatcgaggagaagatctaccatcgacaaatcttc
aaacagtttctgacaaatcgtgtcttgaaagatcctaaacagcaaagattttttaaaact
aatgatctttatgagcttttttctctgactgagggtgaaaaagagaaaacagaatcatct
gccatctttgctgggacaggttcagaaataaaacttggagtgaagaagaaacagagtgag
caaagtgagaaaaaaaaaactgatccacacagaaatagagaaacttgtgataaggtggaa
gtcagctctttgcctaaaggtagagtatttacaaataatccaatgagcaaaacacaaaat
aagagccatgaaaaaaagaaaagtattgctatgtctgttgaaaatgtagataaaaatagt
gcacaagtaggtcttaaccaagtggagaaaatgaaggagcttgctaagctcatcagcaaa
aagattgggagcacaaaaaaattacaggatgaacccatagactccatccatttagactcc
tcacacaaagaagaaggtaacactgatgataaaagtttggattcctcactcataggggaa
ggtaaagatgatgataaaacctcaagtaatatactcccaaataatgatatggaagtgaag
atgagtgaaaacaatgtagatgaagaaaaaccaggaacatttgcagtaaaagatttcata
atcagtaaaccaagtgctgtggaaaacatagcagacatgaaacttgttgcagaaacagaa
acatcttgtacaaaaggtttgacttttacaagtttatcactgtcatgtgaagaggtgtca
catcaccaaggaaaggaaaagagatctacaaagcttgcaaatgttgataaatgtttggaa
aaagctgaagaaaaatcaaagccctcaggaagtatactttttaaggcattaagtatagga
aattatgaaagggagagaaacaaagctcaagaaatgcactcagacaagtttgaaataaat
agtgacttgaatacagaacagattaggaatagcaacaaacataagaaaaagtacaaagat
aaaagcaaggaaaaacacaaggaacatcataaaaaggggaaaaagtttgaaggaatgcgc
attgaatatttagcaaagaagagaaaatataaaaaaacagaggaggaggaaatggaagaa
aaagaactttcaaagtctcaggaccaatatgttcttgaaaaactcttcagaaaatctggg
atccatggtgcccttagtcatgatgccattatgaataatagtgatccagactacctactg
gtggaaggggaggctgagagagtggccaaggaggctctgaaggctgtaagagcctctcgg
gcacggtgctttaggcctcaacctattgaaagtaaacaattgtctcttggaaaaagcaca
cttaaatttgggaaaaataaaagccagatatttaaggaagtcagttatgttggaggtagt
aagatgaaggatggaagtcataaggaacagaaaattcctatgtttagtggaggatttgaa
gaagagataaaagacaacaccgatgtcaaggatggtggtgagagcaagctgaacactcct
ctatgcaatgaacaaggtgtgggatcaagtggtatcctttcatcatctcagttgctctcc
cgcatgcgacagagaaacaaggggattgctcttgattcggagaatgaggaagaggatgat
tatgatcctgattatccatctacagcaccagtggatgaggagagtttagaacctgaaata
caggaaaacatcgaccttttagcagacattagaaactttgtagcatttcaagcagagatt
gatgggcaagctaccactcaggaaataatatccagatttcaagaacgtttgcctgccagc
cagactcctttctttaaagctctcctcactcaaatttgtgacttccacagagataacagt
ggcagagggatttggtctttaaaaggtgaatttaggtaa
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integrated database retrieval system
