Scylla paramamosain (green mud crab): 135112103
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Entry
135112103 CDS
T11531
Name
(RefSeq) AT-rich interactive domain-containing protein 2-like isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135112103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sprm03000
]
135112103
03021 Transcription machinery [BR:
sprm03021
]
135112103
03036 Chromosome and associated proteins [BR:
sprm03036
]
135112103
Transcription factors [BR:
sprm03000
]
Eukaryotic type
Helix-turn-helix
ARID
135112103
Transcription machinery [BR:
sprm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
135112103
Chromosome and associated proteins [BR:
sprm03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
135112103
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
zf_C2H2_ZNF292
IL6
Motif
Other DBs
NCBI-GeneID:
135112103
NCBI-ProteinID:
XP_063882143
LinkDB
All DBs
Position
23:8407803..8456610
Genome browser
AA seq
1779 aa
AA seq
DB search
MTKEMNKDAEAYDREYDGFLKQLEEFHQQRGTPFKRLPRINGKGVDLYLLYVVVTARGGW
QKVNARCEWEDILEDFRLPAACVNSATALKHIYIRYLDAYERVNFLGEDGEERGAEMDEG
EDSRLMRTKRAIRSLNTVPLAYNHQQHNVLESMRASGGMSVDLYRPSLYDKLALSLVSPM
PNEHDFAFNVCTILSNEGRHVLQLSHCPILVEHMLGHTGVYRDWETQKFFLTNYKEAKGR
SLIQFWIDSVHDRSVLDLLIPSGLDPKSSATEGSGELRRYSLVDLSSGAIDNKNLLNLSS
DSLELFDDKEEIDEDDTCDNAFLRDGCMAGGTALKIAGRINSGNFDSLGEPDYRRIPPLE
MITQALRRDPILRRLEKVLECEGSDLKLAKDDGEIFHLGRDLGSQDPEGTRISQILHVIR
NLSFEEHNVGILARSHTCLKFLVLCICSRWGGLAVNALDTLGNIAPEITLQEPKVDSCSA
LFLSNICHGVSSPDRAFVLRSLEILNKLAMNDPNEEILNHYIDSSVYDQICRYLTIHDIM
LLIYTLECLYSLSSLGTPACNAIVRAKGSIHTLISLLTVEAQSYGPEACIGMKVVETVTG
VVSEPEPVSQPPPPPTPAPATVPVTTVGVAAVTPATPVVAISNPVVSVPAGSSVTPKTPL
VKPVSSTPVTPALSSEVSAPAALIGGDPQKLAGRIVPPEVEEFVKDWVTKNYEAAPGNAI
EQAIVYRHFAASMQSLGRKQGLNPVLLSNCVRKVFGTGVGPSRRPVDAGSEKWHYNGIRR
RDGIVVPPLPDKKRGMRVNNSVPVYSPTPVLPPVNSISAQVTSEGRAVGTIIGTPQLVTT
SATPADAVISPSSPILKAQLSAPLRPSPPPPSRPPQGMVSGTMSQGVYSSAQQQQSPQQS
QQQAQPTNRTDNSALIKSLLANKVTPAGVGQAGSMDPHPTHQTPHSRPLLVPSTPPQQPR
GASGAVSYVQALSQGPLGPVGPMLSPTSIGCTSGMQVVSGGVVGGTGGQHGLHQPPQPSS
AQVSRNIQKQQQQQQTTDNSQDSSSDSQVRKTSFNGICNEIKKCEEDSNSLLSNTLNEKK
VTSFEGILQNGIKAEIDIKEEQEPKAKKNVLADLLEKTVGGDILNGVVERELRISDRSLE
FVNNGQQVKVNGPVTSNGQAGTETGQGVKRPATPDNTPAKRIAIEDPRAGTDSRITLYVS
QNGNESGEVISQGHQVVLSQGQQLAATNTTGPQQMVVSQAVLAGQQQGAATQTVVTPQGQ
VILQRPATQTGMIVQQGGQIIQGATAGQVIQQVIQQGQSGQPQKVILHQGQVLGGQMILS
QNSSGQHQVLVQGGNNFQGQVIMQGVPHCQGQVFVQGNNTPGQLVMSSNQGQTVVVSGGT
QAQQQVVVSSAQGQAMIVAGNQGQPVVVSGQQGQSGQVVVPSNVSGTVLLAPQQQGSTAK
TLIILPNPKMIVSGTQHQGAQGQQLVLPRQVAGQQVVQVVSSSTTGPVATVSTAVRTVHA
TAPLAAETCATPAPPTVQIQTSSSGSSSASVSTYSAQNSTTLSTAIAPAPAGPTAVPVTQ
TSVSQGPQTPHIPAPQVLSSGVARRQGKPSGLQYLCEWRGCNQVFTSAAQVYHHACKIHC
PPHIAEIQCGWAGCDPMMRRRFSAMTHLHDRHCNEQLLQILAVRRSQLASTGKTEIPVPQ
TPPPHPGYAPNAAFHAIKRHALEVINQRDAVEKEGPVTKSIRLTAALILRNLVIYSNTGK
KLLRGYESELANVALSTMESSRTVAQILYDIGLPDHQGL
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagaaatgaacaaggacgccgaggcttacgatcgggaatatgatggatttctg
aagcagcttgaggagtttcatcagcagagagggacgccattcaagcgcctaccacgtatt
aatggcaagggagtggatctgtacctcctctacgtggtggtgacggcgcgcggcggctgg
cagaaggtcaatgcccggtgtgagtgggaagacatccttgaggacttccgtctgccagct
gcctgtgtcaactctgccacagccttgaagcacatctacatcagataccttgatgcttac
gaacgcgttaatttcctcggggaagatggggaggagcgcggagcagagatggacgaagga
gaggactccaggctgatgaggaccaagcgggccatcaggtccctcaacactgtcccgctc
gcttacaaccaccaacagcacaatgttctagaatctatgagagccagcggtggcatgtca
gttgatctgtacagaccctcattgtatgacaagctggccctctccttggtgtcccccatg
ccaaatgaacacgattttgccttcaatgtgtgcaccatcctgagcaatgagggccgccat
gtgctccagctatcacattgccccatccttgtggagcacatgctgggacacactggggtg
tacagagattgggaaactcaaaagtttttcctcaccaattataaagaagccaaaggaaga
agccttatacagttctggatagattcagttcatgaccggagtgttttggacctcctcatc
ccctctggcctggaccccaagtcatctgccaccgaggggagtggggagctgagaagatac
agtctcgtggacctttctagtggtgctatagataataagaatttgctaaatttgagtagt
gatagtctggagttgtttgatgataaggaagaaattgatgaggatgacacgtgtgacaac
gccttcctgcgggacgggtgtatggcgggtggcacagcactgaaaattgctggcagaata
aacagtggtaactttgacagtttaggtgagcctgactataggagaattcccccattggag
atgatcacacaagccctccgaagagatcccattctaaggcgattagagaaggtcttggag
tgtgaaggcagtgaccttaagttggcaaaagacgatggagaaatatttcacttaggaaga
gatcttggatcacaggatccagaagggacaagaataagccaaattcttcatgttattcgt
aatttatcatttgaggagcacaatgtgggcattcttgcaagatcccatacctgtcttaag
tttcttgtcttatgtatctgttcacggtggggtgggctggccgtcaatgccctggacacc
ttgggcaacatagcaccagagataacacttcaggaaccaaaggtagactcctgctctgcc
ttgttcctgtcgaacatctgccacggtgtctcatcacccgacagagcatttgtcctcagg
tcccttgaaatcctcaacaagttagccatgaacgatcccaatgaggagattcttaatcac
tacatagattcctcggtttatgatcagatatgccgttacctgacaattcacgacatcatg
ctgctcatatacaccttggagtgcctgtattccctttcctcccttggcaccccggcctgc
aatgccattgtgcgggccaagggctccatccacaccctcatctctctgttgactgtagag
gcacaaagctatggaccagaggcatgcataggaatgaaggtcgtggaaactgtaacaggt
gttgtgagtgaacctgaaccagtgagtcagccaccaccacctcccactccagctcctgcc
acagtaccagttactactgtaggtgtggcagctgtgacgccagccacaccagtagttgct
atcagtaaccctgttgtctcagtgcctgcagggtccagtgtcactcccaagacccccctt
gtcaagcctgtctccagtacccctgtaactcctgcactcagctcggaagttagtgctcct
gctgctttgattggaggagacccacagaaacttgctgggcgaatagttccgcccgaagtt
gaggagtttgtcaaggattgggtcactaaaaattacgaggctgctcctggtaatgccata
gaacaggccattgtataccgccactttgcagcctccatgcagtctttaggtcgcaagcaa
ggcctcaacccagtgctcctgtccaattgtgtaaggaaggtgttcgggactggtgttgga
cccagcagacggccagtggatgcgggctcagagaagtggcactacaatggcattcgacgg
cgagacggcattgtggttcctccattgcctgacaagaagaggggaatgagggtcaacaat
tccgtgccagtttacagcccgacgccagttctccctccagtgaacagcatcagtgcccag
gtgactagtgaggggagggcggtgggaaccattatagggaccccgcagctggttaccaca
tcagcaactccggctgacgctgtcatatctccttcttctcccatcttgaaggcgcagctg
tcagcccccctcagaccgtccccgcccccgccttcgcgaccaccacagggcatggtgagt
ggtaccatgtctcaaggtgtgtatagcagtgctcaacagcaacagtccccacagcagtca
cagcaacaagctcagcctacaaacagaacagataattctgcccttatcaagagtcttttg
gccaacaaggtaactccagcgggagtaggtcaggcaggcagcatggacccacaccccacc
caccagactccccattcacgacccctcctagtcccctccacaccaccacagcaacccagg
ggtgcttcaggtgctgtctcatatgtacaagcactatcccaaggtcccttgggacctgtg
ggacccatgctaagtcctacaagcatagggtgcacctctgggatgcaggtagtgtctgga
ggtgtggtagggggaacagggggccagcacggactgcaccagccaccacagccgtcgtcg
gcacaggtgtcacgaaatattcagaagcagcagcaacagcagcaaaccacagacaatagt
caagatagcagcagtgattctcaagttaggaaaacatcatttaatggaatatgtaatgag
ataaagaaatgtgaagaggactccaattccctactttctaatactctcaatgagaagaaa
gtaacaagttttgagggtatcttgcaaaatggtatcaaagctgaaattgatatcaaggaa
gaacaagaacctaaggccaagaagaatgtcttagctgacctcctagaaaaaactgttgga
ggagacattttgaatggggttgttgagcgtgaattaagaataagtgatcgaagcttagag
tttgttaacaatggccagcaagttaaagtaaatggacctgtcaccagtaatggacaggca
gggacagaaactgggcaaggtgtgaagaggcctgccactccagacaatactcctgccaaa
aggatagccattgaggacccaagagccggaacagacagtcgcatcacactgtatgttagt
cagaatggaaatgagagtggggaagtgatatctcaaggacatcaagtggtgttgagccaa
gggcagcagctggcagccacaaacaccactggaccccagcagatggtagtgagccaggct
gtgctggccgggcagcaacaaggagctgccacacagactgttgtcacccctcaaggacag
gtgatcctccagcggcctgccactcagactggaatgatcgttcagcagggcggtcagatc
attcagggggccactgctggacaagttattcagcaagttatacagcagggacagtcagga
caaccgcagaaagtcatcttacaccaaggacaggtgttgggtggccaaatgattctctct
caaaacagtagtggtcaacaccaagtactagtgcagggcgggaataattttcagggacag
gtaatcatgcaaggtgtgccgcactgtcaggggcaagtatttgtgcaaggaaacaatact
ccaggtcagttggtgatgagtagtaatcaaggccagacagtagtggtgtctggcggcact
caggcacagcaacaagtggtggtgtcgagtgctcagggccaggccatgatagtagctgga
aatcaaggtcaaccggtggtagtaagtggacagcaaggtcagagtggccaagttgtggtg
cctagtaatgtaagtggcacagtactgttggctcctcagcagcaaggatccacagcaaaa
accctcattatattgcccaaccctaagatgatagtgtcagggactcagcaccagggtgct
cagggccaacagttggtgctaccccgccaggtagctggacagcaagttgtacaggtggtg
tcctcaagtaccacaggaccagtggctactgtgtcaactgctgtgagaactgtgcatgcc
actgcccctttagcagcagaaacctgtgctacccctgcccctcccacagtccaaattcag
acttctagtagtggtagcagcagtgccagtgtatccacatatagtgctcagaattcaacc
accctatctactgccatcgctcctgccccagctggtcccacggctgttccagtgacacag
acttcagtgagtcaagggcctcagactccccatatcccagccccacaggtgctctcctct
ggtgtagcaagacggcagggcaaacccagtggtttacagtatttatgtgagtggcgggga
tgtaaccaggtgttcaccagtgcagctcaagtgtaccaccatgcctgcaagatccattgc
cctccacacatagcggagatccagtgtggctgggcgggctgcgaccccatgatgagacgc
cggtttagtgccatgactcacctccacgaccggcactgtaatgagcagctgcttcaaatt
cttgctgtgagacgatcccaactagccagcacaggcaagacagaaataccagtcccacag
actccacctccacacccaggttatgcccccaatgcagccttccatgccatcaagaggcat
gctctagaagttattaatcagagagacgcagtggaaaaagagggaccggtaacaaaaagt
atccggttgactgcagcactgatcctgaggaacctagtcatatattccaatactggaaag
aagctgttgcggggatacgagtcagaactagcaaatgttgccctcagcacaatggaatcc
tcacgaacggtagcacagatcctatacgacatcggccttcctgaccaccaggggttatag
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integrated database retrieval system
