Scylla paramamosain (green mud crab): 135113008
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Entry
135113008 CDS
T11531
Name
(RefSeq) LOW QUALITY PROTEIN: dynein axonemal intermediate chain 2-like
KO
K11143
dynein axonemal intermediate chain 2
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
135113008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sprm03037
]
135113008
04812 Cytoskeleton proteins [BR:
sprm04812
]
135113008
Cilium and associated proteins [BR:
sprm03037
]
Motile cilia and associated proteins
Dynein arm
135113008
Cytoskeleton proteins [BR:
sprm04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
135113008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_Prp19
WD40_RFWD3
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
135113008
NCBI-ProteinID:
XP_063883997
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Position
25:4903481..4922454
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AA seq
580 aa
AA seq
DB search
MNHTXGGWPKDVSLTEDDQKIRYKKKIEKDDGYIHSMLQLGARIEHCIRQNNAIDIYEMY
FEEEEESAVVEDPEPIKTVNVIRDPHAGLRMLTSLSFAPEGGHKIAAAYSSSKFMGLVEH
TPKKSYIWDINTSSHPELELLGPAWIQCLQYNTKDNSVLAAGLSNGQISWWDSRQGSKAA
GATGLSVSHRQMVTALTWLAHKTRCELFSVSLDGQVLWWDTRKLSQPTDSLVLDPAKRTP
SHERALSATCLEYEPTMPTKLMVATEQGQVVACNRRARSAPERISLIYNAHISPIYSIQR
NPFFLKNFLTVGDWTIKLWAEDFKESPILWTKPAPAQLRGGCWSASRSSVLFTGRLDGAL
DAWDLLTSWTAPASTCQVVDEGIEVVVTHEGGDCWGWAVSWALSLSSTCRPDWCSPRTSM
RNSPLQRCVARLYVATLILERETRRERVLEARHKEQRLRERVKGGGTRTATVTAMTVGGG
GGGGGGGGGGGGGGEKENISLSLDDPISNAEREYFRQVEQIKQELEQEEREREEREEHVG
SGVAVEVTQAPDEASSTGNEAPNRAQTLEYLHQIPPCCIS
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacagagggggatggcccaaggacgtgtcccttacagaggatgatcagaagatt
cgctacaagaagaagatagagaaggatgatggatatattcactccatgctgcagctaggc
gcgagaatcgagcactgcatccgccagaacaacgccattgacatttacgagatgtacttt
gaggaggaggaagagagtgcagtagtggaggacccggagcccatcaagacagtcaatgtg
atacgagatccacacgcggggctcagaatgctcacctccctctctttcgctcctgagggt
ggacacaagattgctgcggcatactcatcctcgaagttcatgggactggtggagcacacg
ccgaaaaagtcatacatttgggatattaacacgagcagtcaccctgagctggaattactg
gggccagcctggatacaatgcctccagtacaacacgaaggacaacagtgtactggctgca
gggctaagtaacggacaaatctcctggtgggattcgaggcaaggatccaaggcggcgggg
gcaacaggtctgtcagtgagccacagacagatggtcacggcccttacctggctggcccac
aagacaaggtgtgagctgttctctgtctctcttgatggacaggtactttggtgggacaca
cgcaaactgagtcagccaacagacagccttgttctggaccccgccaagaggacccccagt
cacgagcgggccctcagcgccacctgcctggagtacgagcctaccatgcccaccaaactg
atggtcgccacggagcaagggcaggtcgtggcgtgcaacagaagggccaggagtgcgccg
gagaggatcagtctgatctacaacgcccacatctcccccatctactccatccaacgcaac
ccttttttcctgaagaacttcctgacggtgggcgactggaccatcaagctgtgggcagag
gatttcaaggagtcgcccattctgtggaccaagccagcgcccgcccagctgcgcgggggt
tgctggagcgcctcccggtcatctgttctgttcacggggcgcctggacggggctctggat
gcctgggacctgctcacctcctggacggcccccgcttccacgtgtcaggtggtggacgag
ggcatcgaggtggtggtgacgcatgaagggggagactgctgggggtgggcagtcagctgg
gcactctctctctcctccacgtgccgcccagattggtgcagccctcggacaagcatgaga
aactcgcctttacagcggtgtgtggcgcggctctatgtggcaacacttatccttgagaga
gaaacgaggcgggagcgagtgttggaggcgagacacaaggagcagaggctgagggagcgg
gtgaagggcggagggactcggacggcgacggtgacggcgatgacggtgggaggaggagga
ggaggaggaggaggaggaggaggaggaggaggaggaggagagaaggaaaacatctctctc
tcacttgatgatccaattagcaacgcggagagggaatattttcgacaggtggagcagatc
aagcaggagctggagcaggaggagcgtgagcgggaggagcgggaggagcatgtgggcagc
ggcgtggcggtggaggttacccaggcgcctgatgaagcctcgagcaccgggaatgaagct
ccgaaccgcgctcagacacttgagtacctccatcagatccccccttgttgtatctcttag
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