Scylla paramamosain (green mud crab): 135114765
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Entry
135114765 CDS
T11531
Name
(RefSeq) WD repeat-containing protein 43-like
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
135114765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sprm03009
]
135114765
Ribosome biogenesis [BR:
sprm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
135114765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp12
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR19_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_ACSF4
EIF3I
Beta-prop_Aladin
BBS2_N
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
135114765
NCBI-ProteinID:
XP_063886885
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Position
28:5033043..5061739
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AA seq
665 aa
AA seq
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MHGKYYNFSPSGEKLSQVGPDGMVRVWDTATGVLDHEYQPASHLMAKPSCIQYSPQVSPK
KMNKKAKGDGRSSVLAVATLQGTVLVYSPEKRELLATLDHSQPQAVVDLAWFSSTELFTL
SADNTVVKWNVVTGEKLWCVEVSGGTSLCALGPRNFCVAKSRIEFLSMMKAGRVKVKKNF
TGHTSQVAQLLPLPTESDPVRYFLSSSTDDRFVYAWDLNSEGGDPVASFMVRDQVAGVEA
VELQNNTVTLAVTTQRGSLVLFNQHLNGHTNNTVVKRMGRLQILQEGKEEKVMLPIITAH
FCKDIDHSLIIAYGNSTMLKFERISAKEITGNKQLLRAAPESVAPKKSALAETITPKMTR
DTTVIGPGHLTIAQADESRWDRKRKQGDEDGTLALPMDERLNALVLDKPTDSAATQVPKT
DNQIHLLLQGLHSKDGRILQSILSCGNETMVTNTVRRLPAPAVVPLLKHLQTLFMGKGHK
NAAYVTWVRLVLYHHMSHLSTLPDRQELLRPFYSISASRVATFMQLMELHARLDLSLTHV
ATKHHEAQQAQVEPSALLIYREEESDEDEEIEVPAGISESEDNWEELSDFGEVNGHSDSD
YDDVLHPRSSKRGLEEDEEEEDGGEEVEEIEDSEEEDGSEKDSESQSDMTVDVNESDSDN
SDSDE
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgcatgggaagtactacaacttctccccttcaggggagaagttaagtcaagttggacca
gatgggatggtgagggtgtgggacactgccacaggtgtcctggaccatgagtaccagccg
gccagtcacctcatggccaagccatcgtgtatccagtattccccccaggtcagtccaaag
aagatgaataagaaagcaaagggagatggaaggagcagcgtcctggccgtggccaccctc
cagggcacagtgttggtgtacagcccagagaaaagggagctgctggccaccctggaccat
tcacagccacaggcagtggtggacctggcatggttcagctccacagagctcttcaccctc
tcagcagacaacaccgtggtcaagtggaatgtggtcacaggggaaaagctatggtgtgtg
gaagtgagtggcggaacctccctctgtgcactgggtccaaggaacttttgtgtagccaag
agcaggattgaattcctgtctatgatgaaggcaggacgagtgaaagtaaagaagaatttc
accggccacacttcccaggtggcacagctgctcccactgcccacagagagtgaccccgtc
cggtacttcctttcgtcctccaccgatgacagatttgtctacgcttgggatttgaatagt
gaaggtggggaccctgtggcaagcttcatggtgagggaccaggtggcaggggtggaggcg
gtggagctgcagaacaacaccgtgactctggcagtgaccacccaacgaggctccctggtc
ctgttcaaccagcacctcaatggccacaccaacaacacagtggtcaagaggatgggacgg
ttgcaaatcctgcaggagggcaaggaggagaaggtgatgctgcccattatcaccgctcac
ttctgcaaggacattgaccacagcctcatcatcgcctacgggaactccaccatgctcaag
tttgaacggataagtgcaaaggagatcaccggcaacaagcaactccttcgtgcagcccct
gagtccgtagcgcccaagaagtccgccctggcagagaccataacccccaagatgacccgg
gacactactgttattggcccgggacacctgacgatcgcccaagcagatgagtcaaggtgg
gacagaaaaaggaaacagggagatgaggacggcaccctggcactccccatggatgagcgg
ctcaacgcgctggtcctggataagcctacagacagcgccgccactcaggtccccaaaact
gacaaccaaatacacttactactgcagggtctacacagcaaggatggaaggatcctgcaa
agcattcttagctgtgggaacgagaccatggttaccaacacagtgcgaagactgccagca
cctgctgtggtgcccctcctgaagcatctgcagactctcttcatgggcaaaggacacaag
aatgcagcatacgtcacctgggtgcggctagtcctgtaccaccacatgagccacctctcc
acgctacctgaccgtcaggagctgctgcggccattctactccatcagtgcctcccgtgtg
gctaccttcatgcagttaatggaacttcacgcacggctggacctgtccctcacccacgtg
gccaccaagcatcacgaggcacagcaggcgcaggtggagcccagtgcactgctcatctat
agggaagaggaatccgatgaggacgaggagattgaggttcccgccggaatctcagaatca
gaggacaactgggaggaactttcagactttggggaggtgaatggacactccgattctgac
tatgatgatgtgttgcatcctcgctcctccaaacgtggcctggaggaagatgaggaagag
gaggatgggggagaagaggtggaagagattgaggacagtgaagaagaggatggcagtgaa
aaggacagtgaaagtcaaagtgatatgacagtggacgtgaacgaaagtgacagtgacaat
agtgatagtgacgagtga
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