Scylla paramamosain (green mud crab): 135115304
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Entry
135115304 CDS
T11531
Name
(RefSeq) TBC1 domain family member 1-like
KO
K17902
TBC1 domain family member 4
Organism
sprm
Scylla paramamosain (green mud crab)
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sprm04131
]
135115304
Membrane trafficking [BR:
sprm04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
135115304
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
135115304
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
135115304
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
TBC1D_hel
DUF3350
PID
Motif
Other DBs
NCBI-GeneID:
135115304
NCBI-ProteinID:
XP_063888020
LinkDB
All DBs
Position
1:3533694..3576392
Genome browser
AA seq
1350 aa
AA seq
DB search
MMENLDGGGDGGKQFCFKYRGSTEVDRHYSKPMLPWIISEIKNQQKSEDVLVDITWGNVV
VRNMASGIVTLSHTVRQIHKCVMEQADHTCFLYTLKPVDKEQAPVPGAPGYVCASDPNQL
VPANVFDQNYQCHLMQASDEQHVRNFFACLRQQPREIQPCPESAVSSSFNSLPDLYVHNE
SQFFEVLFVGRVKVSHSKVPPSFIDEALSAFKLRERTRQRNTSGGDSSRPQPNTATITFQ
QEGSGLSVPNITFSSLLAEPGSSTSSRKASKELEKEAIDDQANPEQDKESQKHPKVRFTL
WSSTEETQGSLPSLKTSNLSSDAPSNSSSTEQISSLLPGSSLSSSEMITYLRSCSVPEEQ
SKKLEGSEVKKEGSESEESNKTELPVMEPFRQRLRTVSGDSSQIFRRPTCVQEQGMRARA
GSIGSMTSRSRLHRTSECELKMLSHDFNRTMLFHIGRSEIQLINPEMKSVQLNKNFKDIA
HCCQGIKHNDHFGFICRELNGDIPCYVGYVFMCQISAVTDEIMQALSKAFTAVHEAQVRE
RQENLLCDQCPMRWFSMLCAEVEGMAAAKAHTTIMKRISSLPEEEKSILIAKYEGAEASE
TQIQNNILMMLLRTHFETKQASHTHLALPGGGVKPDNQMGGNLESSLRRAKKSLTTSFNQ
LLKRDGRESESSERETTTEEEQNSGFNTNPVEKTHPMPALSSRVKMEGLSDSPLGHRPRS
STVSSAGGDSMRREFMARRAAAKQKVVSSKIECAVLDKTESTSGSQVSPKRNIFLKVGSP
TPRNTQEEENSGDGKLAPKSMSFRHAILQKVVSPPKRIDSLDQLGSRTVELSTSPSKKSK
QQLKIIWKKAVFQQILLNRFERENQRLRAHQQQVAMQRVRLNYEEDEIHIEAVQAWQLML
TRPSARIDSNILHSGIKQGVPKSLRGDVWQLLMYQYLARNSKMEPQFPGYNTPYEDMIKE
LTSQHHAILIDLGRTFPTHPYYMQTLGPGQLALFNVLKAYSLLDKDVGYCQGLSFVGGVL
LLHVEEEVAYNLLKHLMFVMGCRQQYRSDLIGLQVQMYQLSRLLRDKLKRLHDHFEENEV
TPQLFAAPWFLTLFASQFSLSFVSRVFDLLFMDGMEAVFCVALVLLKTHEEALLACDSFE
QIMEYMKTSMSTLHPNQIGNIISQACDCSLSKELQAYEVEYHVLQEEAALSPLNNAEYSK
LKEANKNLKRQNLDLLEQLHHANSQQHALEASNQSLQQSQHHLEVRVRWLELERGNLKQL
VSLLAQNVPSHTLSSIPANLQRFLPSEPEKKEEAKKTTEDKEKEQTKESDDISSSLPSQS
HHQQNQSGQRSVTMDYGMMHRYIKNLVGHD
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaatctggatggaggtggggatggaggaaagcaattctgcttcaagtaccga
ggtagtactgaagtggatcgccattactccaaacccatgttaccctggatcatctctgag
atcaagaaccaacagaaatcagaagatgtgttggttgacatcacttggggcaatgtggtg
gtgcgaaatatggcatcagggatagtgactttaagccatacggtgcggcagatccataaa
tgtgttatggaacaggctgatcacacttgctttctttatacactcaaacctgttgacaaa
gagcaggctcctgtgcctggtgctcctgggtatgtgtgtgctagtgatcccaatcaactt
gtaccagcaaatgtctttgatcaaaattaccagtgccatctgatgcaagcatctgatgaa
cagcatgtccgcaatttctttgcgtgtttgcgtcagcaacctcgggaaattcagccatgt
cctgagtcagctgtcagcagctccttcaattcacttccagacctttatgttcataatgaa
tctcagttttttgaggtgttattcgttggaagagtgaaggtttcccattcaaaggtgcca
cccagttttattgatgaagctttatcagcttttaaacttcgtgagagaacaaggcagcga
aatacatctggaggggatagttctcggcctcaacccaacactgcaacaataacatttcaa
caagaaggaagtggtctatctgttcccaacattaccttctccagtctgttggctgagcca
ggcagcagtactagtagtcgcaaagcatcaaaggaacttgaaaaggaggctattgatgat
caagcaaatccagaacaggataaggaatcacaaaagcatcctaaagttcgattcactctt
tggtccagtactgaagagacccaaggatccttaccatcattgaaaacttctaatctgtca
tctgatgcacctagcaactcttcctcaactgagcaaatttcatctcttttacctggatcc
agtttatcatcatctgaaatgatcacctacctcaggtcttgcagtgttccagaagaacaa
tccaaaaaattggaaggttctgaagtcaaaaaggagggctcagagagtgaagaaagcaat
aaaactgagttgcctgtgatggaaccctttcgccagcgccttcgcacagtcagtggagac
tctagtcagattttcagaaggccaacttgtgttcaggagcaaggcatgagggcacgtgcg
ggttctattggcagcatgaccagccgtagccgtttgcaccgtactagcgaatgtgagctc
aagatgctaagccatgacttcaatcgaaccatgctgttccacattggccgcagtgaaatc
caacttattaatccagaaatgaagtctgttcagctaaataaaaacttcaaagatattgct
cattgctgccaaggtatcaaacacaatgatcactttggctttatctgtcgggaactgaat
ggagatataccttgctatgtgggatatgtcttcatgtgccaaataagtgctgtgacagat
gaaataatgcaagctttaagtaaggccttcactgctgtgcatgaggctcaggtacgagag
aggcaagagaatttgctgtgtgatcaatgccctatgcgatggttcagcatgctgtgtgca
gaggttgaaggaatggctgcagctaaggcacacactacaatcatgaaacgaatttcaagc
cttcctgaagaggagaagagcattttgatagccaaatatgagggagcagaggcctctgaa
acacagattcagaataacattttgatgatgttattgagaacccactttgaaactaaacag
gcatcacatacccacttggctctgcctggtggaggagtcaagcctgacaaccagatgggt
ggcaacctggagtcatccctgcgtcgagctaagaaaagtttaacaacttcatttaatcag
ttactgaaaagagatggcagagaaagtgaaagttctgaaagggagaccactactgaagag
gaacagaattctggatttaatacgaatccagtagaaaaaacacaccccatgcctgcatta
tcatctagagtgaaaatggaaggcctaagtgattccccacttggtcaccggccacgctcc
tctacagtcagctcagctggtggtgacagcatgaggcgggagttcatggccaggcgtgca
gcagccaagcaaaaagttgtttcaagcaaaattgagtgtgctgtgttagacaaaactgaa
tccacaagtggttctcaagtgtcacccaaaaggaacattttcctcaaggtcggctcaccc
actccacgaaatacccaggaggaagaaaactcaggagatggcaaattggctcctaaatca
atgtctttcagacatgccatccttcagaaagttgtgtctcctcctaagagaattgattcc
ttagaccagttaggaagccggactgttgaattatctacctccccaagtaagaagtcgaag
cagcagctgaagatcatatggaagaaggcagtgtttcagcagatccttctcaatcgtttt
gagagggaaaatcagcgtctaagagctcaccagcaacaagtggcaatgcagcgtgtgcga
ttaaattatgaagaagatgagattcatatagaagcagtacaagcttggcaacttatgtta
accagaccttcagctaggatagattccaatatccttcatagtggcatcaagcaaggagta
cccaaatcactgcgaggagatgtatggcagttgctcatgtatcagtacttagccagaaat
tccaagatggaaccccagttccctggatacaacacaccttatgaggatatgatcaaggag
ctcacatcccaacatcatgctatccttattgacctgggtcgtacttttcccacgcacccg
tactacatgcaaacacttggtccaggacaactggcattattcaatgtgctaaaagcatac
tcacttctggacaaggatgttggatactgccaaggcctcagctttgttggtggagtctta
cttcttcatgttgaagaagaagtggcatataacttactgaaacatttaatgtttgttatg
ggctgtcggcaacaatatagatcagatctgattggccttcaggtacaaatgtatcagttg
tctcggctgctacgagataaactgaagagattgcatgatcattttgaagaaaatgaagtt
acaccccagctgtttgctgctccatggttcttaacactgtttgcatcacagttctcattg
agctttgtgagcagagtatttgacctcttgtttatggatggaatggaagcagtgttttgt
gtggccttagtgctgctgaagacccatgaggaggctctcttggcatgtgactcctttgaa
caaatcatggagtacatgaagacttcaatgtctacactccatcctaatcaaataggaaac
attatatctcaagcctgtgattgttcattgagcaaagagctacaggcatatgaggttgag
taccatgtcttacaagaagaagcagcactgtctccgttaaataatgcagaatacagcaag
ttaaaagaagctaataaaaacctcaagcggcaaaatttggaccttttggagcaacttcac
catgctaattctcaacaacatgcactggaagcctctaatcagagtctgcaacagagtcag
catcatttggaggtacgagtcaggtggcttgagttggaacgtggaaatctcaagcagttg
gtcagccttcttgctcagaatgttccatcacataccctatcctccattcctgccaatctt
cagcgttttctccctagtgaacctgagaagaaagaagaggcaaagaagactactgaagat
aaagaaaaggaacagactaaggaatcagatgacatatcatcatctttaccttcccaaagc
catcatcagcaaaaccaatctggtcaaagatcagtgacaatggactacggtatgatgcac
cgttatataaagaatcttgttggccatgactaa
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