Scylla paramamosain (green mud crab): 135115305
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Entry
135115305 CDS
T11531
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03013
Nucleocytoplasmic transport
sprm03015
mRNA surveillance pathway
sprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135115305
09122 Translation
03013 Nucleocytoplasmic transport
135115305
03015 mRNA surveillance pathway
135115305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sprm03019
]
135115305
03041 Spliceosome [BR:
sprm03041
]
135115305
Messenger RNA biogenesis [BR:
sprm03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
135115305
Spliceosome [BR:
sprm03041
]
Common components
Common spliceosomal components
Cap binding complex
135115305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Kazrin
WIT1_2_N
DUF6362
Motif
Other DBs
NCBI-GeneID:
135115305
NCBI-ProteinID:
XP_063887978
LinkDB
All DBs
Position
29:11829786..11844889
Genome browser
AA seq
790 aa
AA seq
DB search
MSRRKFDEMSEYDSSRDRKRRRTDAVEIEDRLESLIIRVGEKSTSSLESNLEGLASVLEA
DINNYKGKILKILSDCAVKMPEKTTIYTTLVGLLNAKNYNFGGEFVDMMARKLKEAVKAC
MWKTARYVLRFFADLVNCHVISTNSLLQLLHTFLDTARDDNSPQVRSDTYVYAVLSCLPW
VGRELYEKKEQDLERLLKHIEIYVRKRSRKHMPGLRVWRSDRPHPQEEYLDCLWAQICKL
RSDNWQEKHIARPYVAFDSILCEALQHNIPQITLPPHHSDNTYTFPWVVFRLFDYTDCPE
GPVLPGAHSIERYLIEEHLHNIIKEYHLERKQCAAVLLDFPLKHKIPLEYMIVEVVMAEL
FHLPVPRYLEICYGSLLIELCKLQPATMPQVLAQAVELLFDRIDTMNVCCFDRFVNWFAY
HLSNFQFKWSWDDWLEAAQLDPMHPRAKFIIEVLLKAMRLSYRQRIAEVVPEQFDCFVPL
KPEPVYKFSIDTADADLPGLDTAQRLESVVRAKGSTAEVLQVLAELPNPLRENEDSEPTH
NPLQIQVFVQTLLHLGSKSFSHAFAGISKFLKVFESTVGNNEEGQLIVLREMHDVWSTHQ
QMVVMLCDKFLRTQIVSCATMANWIFSKEMTSEFTKNYIWEILHGTIRKMNKHVAKLQRE
VNEARERRTGNESDDSSSDDEEQRPRPSEEEIERMEEKLETAQADQKNLFLIIFQRFIMI
LSEHLVRCDTDGRDFNTHWYRWTIGRLHQIFMMHNTQVERYSQTLSTLLFTQDLEPHILD
AFNQFVALRS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccggaagttcgatgagatgtcggagtatgactccagcagggaccgcaagagg
cgccgcactgatgccgtagagatcgaggaccgcctggagtccctcatcatcagggttgga
gagaagagcacctcatccttggagagcaacttggaggggctggccagtgtgctggaggcc
gacatcaacaactacaagggcaagattctcaagatcctgagtgactgtgctgtcaagatg
cccgagaagaccaccatctacaccacccttgttggcctccttaatgccaagaattacaac
tttggtggcgagttcgtggacatgatggcccgcaagctgaaagaggccgtcaaggcatgc
atgtggaagaccgcccgttacgtccttcgattctttgctgacctggtcaactgtcacgtc
atctccaccaactccctgctgcagcttctccacactttccttgacaccgctcgggatgac
aactcgcctcaagtgcgcagcgacacctacgtgtatgccgtgctgagctgcctcccatgg
gtggggcgggagctgtacgagaagaaagagcaagacttggagcgactccttaagcatatt
gagatctacgtcaggaagcgtagccgcaaacacatgccggggctcagggtgtggcgctcc
gaccggccacacccgcaggaggagtacctggactgcttgtgggcacagatctgcaagctg
cgatcagacaactggcaggagaagcacattgctaggccctatgtggcattcgactccatc
ctgtgtgaagccctgcagcacaacatcccacagatcaccctgccgccacaccactcagac
aacacctacaccttcccctgggtggtgttcaggctgtttgattacacagactgccctgag
ggtcctgtgctgcctggtgcccactccattgagcgctacctgattgaagagcacctacac
aatatcatcaaggagtaccacctggagaggaagcagtgtgccgccgttctgttggacttc
cccctgaaacacaagatcccgctggagtatatgatagtggaggtggtgatggctgagctc
ttccaccttcctgtgcctcgctaccttgagatctgctacggctccctcctcatcgaactg
tgcaagctgcagcccgccacgatgccccaggtgttagcacaagccgtggagttgttgttt
gatcgtatagacaccatgaatgtttgctgcttcgacaggtttgtgaactggtttgcatac
cacttgagcaacttccaattcaagtggtcatgggatgactggctggaggcggcacagctg
gatcccatgcaccccagggccaagttcatcattgaggtgctgctcaaagccatgagactg
tcttaccgccagaggatagccgaggtggtgcctgaacagtttgattgcttcgtgcccctc
aagcccgagccggtgtacaagttctccattgatacggcagatgcagacttgcctggcctg
gacacagctcagcggctggagtcagtggtgcgagcaaaggggtcaaccgcggaggtgctg
caggtcctggccgagctgcccaacccactaagggagaatgaggactctgagccaacacac
aaccccctccagatccaagtgttcgtacagacgctactgcatctcggctcaaagagtttc
tcccacgccttcgccggcatctccaagtttctgaaggtgtttgagagcactgtgggcaac
aacgaggaagggcagctgatagtgctgcgggagatgcacgatgtgtggtctactcaccag
cagatggtggtaatgctgtgtgacaagttcttgcgcacacagattgtcagctgtgccacc
atggccaactggatcttcagcaaggagatgacctcagagttcacaaagaactacatctgg
gagattctgcatggcaccatccgcaagatgaacaagcacgtggccaagctgcagcgggag
gtgaatgaagcacgggagaggaggacgggcaacgaatcagacgactcttcctccgacgat
gaggagcagcggccccgtcccagcgaggaggagatagagcgcatggaggagaagctggag
actgcacaggctgatcagaagaaccttttccttattatcttccagaggttcatcatgatc
ctgtctgagcatctggtccgctgcgacacagacggccgggacttcaacacacactggtac
aggtggaccattggacgcctgcatcagatcttcatgatgcataacacacaagtggagagg
tacagccagaccctcagcacactgctcttcacccaggacttggagcctcacatcctggat
gccttcaaccagttcgtggccctgcgctcctaa
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