Scylla paramamosain (green mud crab): 135115653
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Entry
135115653 CDS
T11531
Name
(RefSeq) cell adhesion molecule Dscam2-like
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
sprm
Scylla paramamosain (green mud crab)
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sprm04515
]
135115653
Cell adhesion molecules [BR:
sprm04515
]
Immunoglobulin superfamily
Other
135115653
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
fn3
ig
V-set
FN3_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
C2-set_2
Ig_5
Ig_PDGFR_d4
Ig_C17orf99
C2-set
Motif
Other DBs
NCBI-GeneID:
135115653
NCBI-ProteinID:
XP_063888647
LinkDB
All DBs
Position
29:17031136..17156685
Genome browser
AA seq
1732 aa
AA seq
DB search
MGKRGGLSCFSKMAALVVMVMLCGGVGGARGYLTHSTPSFHTLGRPHGSTIRRLGLAKDP
SRIPQTHPLVPDPPQDSIGYTQNSSPPRLLELQDPPRVLGLAEDLYFTTEPQRHLYFTNT
SGAVVNCVAEGVPPPTVTWTLADDRPLDQVVGPLLKVLSNGSLIFSPFPAAHYDARVHAA
VYTCRASNPAGTLLATPTLVRAVVVADFEVQVYDRLVMAGNTGVLHCVVPSYLREFVTVT
SWLIGDHLHVYPSLHGDGKYHMTESGDLHVLRVAPADGRSRFRCRVLHKLTGASHLSQSP
ARIIVTEAEGGVAPQMGERGGRQVVAAGQQVTLPCIAQGHPPPSTLQVSPREIQVDAGGT
VELVCHVSGSPVEEVRWVKDGRKVRSNGRVTVRPKEVLRVSSLQPSDAGLYQCSASHGSH
YAHAHARVTLGASPPELQYQFIEQTLQPGPAVSLKCIATGSPTPHVTWTLDGFPLPHSHR
LVKGQFVSASGEVISHVNISSVQVVDGGSYTCAAENSAGIAAHSARLNVYGPPQVRPMGQ
LTAVAGRTFTVSCPAAGHPISVIKWTKDGVQLPRSHRQRVLANGTLVLLQVTLGADDGRY
ACTASARTGRSDTQSLQLQVLVPPKLAPFSFAAMTREGLRAQVTCMVQEGDQPVRFAWTQ
NGRPLDARLGVRTSQLDAYTSILVVERASSAHSGNYTCTATNAADATSSTATLTVSVPPS
WVVEPSGGSVALGGSLALPCLARGFPRPTTTWLTQTASGEFVRVGEGGKVGAGGLEQWSN
GTLWVARASRSHEGRYLCEADNGVLPVVSKLVNLTVNEPPWFVESEQRQQVRVGAIATLT
CHAHGDDPLTLTWTRDAAPLPPSPGELVYQVSVREGTAAEDSSGRGSSGKEGELLIQDAR
LSDSGTFTCTASNTHGTRTSRLHLLVQDVPAPPSAVRVGERGSRHLLVTWTPPEDSNAPI
TAYVITVKPLPAGSSGGREERVRGQEVRAVVGGLTPATRYTVSVAAVNSVGRGRGSPPLN
DATHEEAPSAPPQNVKVGVTWDPPPPNTTHGTLLGYQLGLKPHSDGENGAYNFTSVGGVG
GTGSSRVGGLRPHNRYVVVVRALNSKGPGPLSPPAHTATLQDKPSAPPGQVRCEALSSSA
LAVTWVPPSPDHRNGDLTTYRVAFWVAASPDAEGEGGSVATEGLRARLEGLLPFTNYSIS
VSAATRAGQGVASPALTCTTHQDVPEAPARVKAVVSGSRAAIVSWAPPARPHGRLTRYTV
HWAAGSGGAALSRRVDPQLTHLALRDLPHAAHQVWVTAATQKGEGPPSPVVIVKPSHTVP
AGVWAVGGNVTAAWREDISLACGAVGVPEPILSWTHQGKPIPSTNAHTNGGPVVQRDGTL
TLGDLERKDGGRYTCTATNTHGSDTVIYHLTVLASSIKVQWTVEDEGGAAVLGATIHFRA
AGETWKQASVGGETTAFTARDLRCGTLYHLYLTVHNRVEGQQQRRYYHLRLASVYSTQAT
LYLGQWGDGGCPITHFSQHYRPKPAGPWTTGKLREKRGFESRAQESEVGTGVWEGVPPAP
PPAWEDPRVLVPALVSVGALLLTLATVCVCLRRRPTNRPPQKGDGAVAAGGAGEEKAAAA
GRGEQLYTALRRPAPTPPMHDHRRPSGEYPGEELYHYAAATYQMDGSSPPPPPAPPSPPI
HAHHRPPAQQTRPHKAFTALVYQPPSLHDVDSPNLNQLSATGTVVLQCSPLA
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagcgtggtggcctgtcatgcttttccaagatggcggcgctcgtggtgatggtg
atgctgtgcggaggtgttggtggtgcacgtggctacctgacccacagcaccccaagcttc
cacaccctaggacgtccccacggttccacgatacggcgtctgggactcgctaaggatccc
tcacgcatccctcagactcacccactggtaccggatccgccacaggactctataggatac
acacagaattcctctcccccaaggcttttagagctgcaggacccccctcgcgtccttggc
cttgcggaggatctgtactttaccacggaaccacagcgtcacctgtatttcaccaatact
tcaggagccgtggtgaactgcgtggctgaaggtgttccgccccccactgttacctggacc
ctcgctgatgatcgcccgctcgaccaggtagtgggtcctctcctgaaggttctctccaac
ggctccctcatcttctcacccttccctgccgcacattacgacgccagggtccacgccgct
gtctacacctgccgtgcctctaaccctgcaggcacgcttctcgccacaccaaccctcgtc
cgtgcagtggtggtggcggactttgaggtgcaggtgtacgatcgtctggtgatggcgggc
aatacaggtgtgctgcattgtgtggtaccaagttacctgcgtgagtttgtgacggtcact
tcttggctcattggcgaccacctacacgtgtacccttccctgcacggtgacgggaagtac
catatgactgaatctggcgacctacacgtgctgagagtcgccccagctgatggccgctcc
aggttccggtgccgcgtgctgcacaaactgacgggcgcctcccacctgtcccagagcccc
gccaggatcatcgttacagaggctgaggggggagtggcgccgcagatgggggaacgcggt
gggcggcaggtggtggcggctggtcaacaggtgactctgccgtgcatcgctcaaggtcat
ccaccccccagtacactacaggtaagccctagggagattcaggtggacgcggggggtacg
gtggagctggtgtgccacgtctctggatcccccgtggaggaggtgcgctgggtgaaggac
ggcaggaaggtgaggtcaaacggtcgggtcacggtgcgccccaaggaggttctgcgtgtc
tccagcctgcagccttccgacgccggcctgtaccagtgctccgcctcccacggctcccac
tacgcccacgcccacgcccgtgtgactctgggagcgtcgccgccggagttgcagtatcag
ttcatcgagcagacccttcagcctggcccagctgtgtccctcaagtgcatcgccacgggc
agccctacgccacacgtcacctggactttagacggcttcccgctgcctcactcacacaga
ctcgtgaaggggcagttcgtgtcggccagcggggaggtgataagccacgtgaacatcagc
agcgtacaggtggtggacggcggctcgtacacctgtgccgcggagaacagtgcaggcatc
gcggcgcactctgcaagactcaacgtgtacgggcctcctcaggtgcgtcccatgggccag
ctgaccgcggtggctggccggacctttactgtgagctgccccgctgctggacacccgata
tctgtcatcaagtggacaaaagacggggtgcagctgccacggagtcatcgtcagcgtgtg
ttggcaaacgggacgctggtactgctgcaggtgacgctgggggcggatgacggccgctac
gcctgcaccgcctccgccaggacaggcagatctgacacccagagcctacagttgcaagtc
ctggtgcctcctaagctcgcgcccttcagcttcgcggccatgacacgggagggactgagg
gcgcaggtgacgtgtatggtgcaggaaggggaccagccagtcagatttgcgtggactcag
aatgggaggccgctggatgcacgcctaggggtgaggacctcgcagcttgacgcctacact
tccatcctggtggtggagagagcgtcatctgcacactccgggaattacacgtgcactgcc
actaatgctgccgacgccacctcgtccacggccacccttactgtcagtgtaccgccgtcg
tgggtggtggagccgagcggaggcagcgtggccctcggaggctccctggcgctgccctgc
cttgcgcgtggcttccccagacccaccaccacctggctcacgcagacggcttcaggagag
ttcgtgcgcgtgggtgagggtggcaaagtgggcgcgggggggctggagcagtggagcaac
ggtacgctgtgggtggcgagggcgtccaggagtcacgaggggcgctacctgtgcgaggcg
gacaacggagtgctgcctgtggtgtccaagctggtcaatctcacggttaatgagccgcct
tggtttgtggagtcagagcagcgtcagcaggtaagggtgggcgccattgccaccctcacc
tgccacgcccacggagacgacccccttaccctcacctggacgagggatgccgcccccctc
cccccatccccaggggagttagtgtaccaggtgtcggtgcgtgaggggacagcggcagag
gacagcagtggccggggtagcagcggcaaggagggagagctactgatacaagatgccagg
ctctcagactccggtaccttcacttgcactgcctccaacacacacggcacacgaacctcg
cgactacacctcctcgtgcaagacgtgccagcgcctccctcagcagtgcgggttggggag
cgtgggtcgcgtcacctgcttgttacctggacgccgcctgaggattctaatgcccccatc
actgcttatgtcatcactgttaagcctcttcctgctgggtcgagtggggggcgggaggag
cgggtgcggggccaggaggtgcgggcagtggtgggcggcctgactcccgccacccgctac
accgtcagcgtggcggccgtcaacagcgtggggcgtgggcgtggctctccgcccctcaac
gacgccacgcacgaggaggcgccctctgccccgccccagaatgtgaaggttggtgtcacc
tgggacccaccgccccctaacaccacccacgggacactcctgggctaccaattgggactc
aagccacacagtgacggagagaatggcgcctataacttcaccagcgtggggggcgtggga
ggcaccggcagctcgcgggtgggagggctgcgtccccacaaccgctacgtggtggtggtg
cgcgccctcaactcgaagggccccggacctctctccccgccagcccacaccgccaccctt
caggacaagcccagcgcgccccccggccaggtgcggtgtgaggccctgtcatcttcagcc
ctcgccgtcacctgggtaccgccttcccctgaccatcgcaacggagacctcaccacctac
cgcgtcgccttctgggtcgccgcctcccctgacgcggaaggagagggcggcagcgtggcg
acggagggactgagggcgcggctggaggggcttcttcccttcaccaactactccatcagc
gtgtctgcagcgacgagggcaggacagggcgtggcctcccctgccctcacctgcaccacg
catcaggacgtccccgaggcgcccgcacgtgtgaaggcagtggtgtcaggctcgcgggcg
gccattgtgtcttgggcgccaccagcacgcccccacggccgtctcacgcgctacacggtg
cactgggcggcgggcagtggcggggcagctctcagtcgccgcgtggacccccagcttacc
cacctggcactgcgcgacctgccccacgccgcgcaccaggtgtgggtaacagccgccacg
cagaagggggaaggaccgcccagccccgtggtgatagtgaagccatcccacacagttccc
gcgggcgtgtgggcggtgggcggcaacgtgactgcagcgtggcgggaggacatcagcctg
gcgtgcggtgccgtgggagtgccggagccgatcctctcctggactcaccaaggcaagccc
atcccgtccacaaacgcccacactaacggagggcccgtggtacagcgtgacgggacccta
accctgggagacttggagcgcaaggacggggggcgctacacgtgcacagccactaacacc
cacggaagcgacactgtcatctaccacctcactgtgctggcgtcttccatcaaggtgcag
tggactgtggaggacgagggaggagcagcggtactcggggccaccatacatttcagagcc
gccggggagacgtggaagcaggcgagtgtgggaggggagacgaccgccttcacagcccgg
gacttgcgctgcggcaccctctaccatctgtacctcaccgtgcacaaccgtgtggagggt
caacaacagcgcagatattatcatttacgcctcgcctctgtgtactccacgcaggccaca
ctgtacctgggccagtggggcgacggcggctgccctattacccatttcagtcagcactac
cgccccaagcctgccggaccctggaccactggtaagctacgggagaagaggggctttgaa
agtcgtgctcaggagagcgaagtgggcactggggtatgggaaggcgtgccccccgcgccg
ccccccgcctgggaggacccccgagtgctggtgccggcgctggtgtccgtgggcgccctc
ctcctgacgctggccaccgtctgcgtgtgtctccgccggcggcccacgaaccgccccccg
cagaagggtgacggagcagtggcagcaggtggggcaggggaggagaaagcggcggcagcg
gggcggggggagcagctgtacaccgccttgcgaagacctgcccccaccccacccatgcac
gaccatcgccgcccctctggtgagtacccaggggaggagctgtaccattacgctgctgca
acttaccaaatggacggaagtagccccccaccgcccccagcccccccctcgccgcccatc
cacgcccaccaccgcccacccgcgcagcagacacgcccgcacaaagccttcaccgctctc
gtgtaccagccgccctccctgcatgatgtggactctcctaatctgaaccagctgagtgca
acagggacggtagtgttgcagtgttcgccattggcctga
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