Scylla paramamosain (green mud crab): 135115749
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Entry
135115749 CDS
T11531
Name
(RefSeq) integrin beta-PS-like isoform X1
KO
K05719
integrin beta 1
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm04145
Phagocytosis
sprm04512
ECM-receptor interaction
sprm04517
IgSF CAM signaling
sprm04518
Integrin signaling
sprm04820
Cytoskeleton in muscle cells
sprm05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
135115749
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135115749
04517 IgSF CAM signaling
135115749
04518 Integrin signaling
135115749
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
135115749
09142 Cell motility
04820 Cytoskeleton in muscle cells
135115749
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
135115749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sprm04131
]
135115749
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sprm04147
]
135115749
04515 Cell adhesion molecules [BR:
sprm04515
]
135115749
04090 CD molecules [BR:
sprm04090
]
135115749
Membrane trafficking [BR:
sprm04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
135115749
Exosome [BR:
sprm04147
]
Exosomal proteins
Proteins found in most exosomes
135115749
Cell adhesion molecules [BR:
sprm04515
]
Integrins
Integrin beta subunits
135115749
CD molecules [BR:
sprm04090
]
Proteins
135115749
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
Integrin_b_cyt
EGF_2
vWA_SIBA-E
I-EGF_1
EGF_Teneurin
EGF_TEN
VWA
PGAP1_3rd
SDH8
YiaV_TM
Motif
Other DBs
NCBI-GeneID:
135115749
NCBI-ProteinID:
XP_063888778
LinkDB
All DBs
Position
29:complement(16413843..16426288)
Genome browser
AA seq
788 aa
AA seq
DB search
MQGRKSLIVALAVAMTAMVSPVTGENNCEYRTCSECIAAPTCAWCSHPNITSVELDSGGT
LTHCISSNSFKFEKFIESCKGYITDPVSANSTKKDEELSDNPIVQLKPQHISLEMRAGDS
ARITVKYKHLSSYQLDLYCLMDGSKSMSSSKAELANVTYELVENLEKLSNNMQLGFGMFV
DKPILPYTDMFVWSQDNCKGCVESFSFKNILPMTDEREKFEDKVKNTGSSTNVDRPEGML
DALMQVVSCENEVEWRTEALKVVVVFTDAGFHVAGDGKLAGIALPNDKQCHLDSTGEYTH
SKLQDYPSISELQHALETNKVYTTFAVKQSLIPVYSLLASRLPRSDCGVKNNASDIINLI
TNFAKGIISTVELNKPKDIMQEVALNVTSRCKGNEEKASSTCKDMSPGDEAEFFINIKVK
SCPQKEHHSTTLNFTLDGYSQFFLLDLKLLCQCECEKQSDQGFISNADDCNNEGDLTCGV
CSCHEGFLGDKCQCKEGDLSNQEISEKNCIQPNTSTSLVCSGQGECVCGTCKCNERLTPN
EIITGQYCQCTNYKNCYGANGDICSGNGECNCDKCLCNEGWEGERCDCQKSTTECQVSDE
KEVCSSHGMCVCNQCQCEEGYLGKYCEDCQNCEGKCDEHKSCVECLVFDLKAACTDKCST
YDVTIVSNMSKEYGQLCSSTDDEECSFLYQFKHEKDTVLLWAQKQKECPVEINPWAVVGG
ILGAVVLVGLLLLIAWKVVTHFKDKREYENFMKNKSMAIWSENVSPLYKPATTMVKNPLF
ESTSTGQN
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgcagggaaggaagtccctaattgttgcactagctgtggcaatgacagctatggtgtcg
ccggtaactggtgagaacaactgtgaatacaggacatgctcggagtgtattgctgcccca
acctgcgcttggtgttcccatccgaacatcacctcagtggagttagactcaggaggaaca
ctaacccactgcatcagtagtaattccttcaagtttgaaaaattcatagagtcttgcaag
ggttacatcactgacccagtcagtgcaaacagtactaaaaaggatgaagaactctctgat
aatcctatagtgcaactcaagccacagcacatcagcctggagatgagagcaggagactct
gccagaatcaccgtcaaatacaaacacctgtccagttaccaactggacctgtactgcctg
atggacggctccaagtccatgtcgtcctccaaggctgagcttgctaatgttacatatgag
ctggtggagaaccttgagaagctttccaataatatgcaacttggttttggcatgtttgtg
gacaagccaatattgccatacacagacatgtttgtgtggagtcaagacaactgcaaaggg
tgtgtggagagtttcagcttcaaaaacatccttccaatgactgatgaacgagagaagttt
gaggacaaggtcaaaaacactggttcctccaccaacgttgaccggcctgaaggcatgctg
gatgccctcatgcaggtggtgtcatgtgaaaatgaggtggagtggcgaacagaagcactg
aaagtggtggtggtgttcactgatgctggattccatgttgctggggatggcaagcttgca
ggtattgccttgccaaatgacaaacagtgtcacctggatagtacaggggagtacacccac
tccaagctgcaggactatccttccattagcgagctccaacatgcactggaaaccaacaag
gtatacaccacttttgctgtcaaacaaagtctgataccagtgtacagtttactggccagc
cgcctgcctcgctctgactgcggtgttaaaaacaacgctagtgatattatcaacctcatc
acaaattttgccaaagggatcatttcaactgttgaattgaacaaaccaaaagacataatg
caagaagtagctttgaatgtgacttctcgttgcaaagggaatgaagagaaggcctcaagc
acctgcaaagatatgagtcctggtgatgaagccgagttctttatcaacatcaaggtgaag
agttgtccccaaaaggagcaccacagcaccaccttaaacttcactcttgatggctactcc
cagttcttcctgttagacttaaaactactatgccagtgtgagtgtgagaagcagagtgac
cagggatttatctccaatgcagatgactgcaacaatgaaggagacttgacatgtggagtg
tgttcctgccatgaaggtttcttaggagataagtgtcagtgtaaggagggggatttgagt
aatcaagaaattagtgagaaaaattgtatccaacccaatacatctactagtctggtgtgc
agtggccagggcgagtgtgtctgtggcacctgcaagtgtaatgagaggctcactccaaat
gagatcatcacaggccagtattgtcaatgtactaattacaagaactgctacggtgcaaat
ggagacatttgctctggtaacggggagtgcaactgtgataagtgtttgtgcaatgaaggc
tgggaaggagagcgttgtgactgtcagaagagtacaacagaatgtcaggtgtcagatgaa
aaagaagtctgctcaagtcatggcatgtgtgtctgcaaccagtgtcagtgtgaagagggc
tacttagggaagtattgtgaggactgtcagaactgtgaaggcaaatgtgatgagcacaag
tcctgtgtcgagtgtttagtgtttgatttaaaggctgcatgcactgataagtgctccacc
tatgatgtcaccattgtctccaatatgtcaaaggagtatggtcagctgtgttccagcact
gatgatgaagaatgtagcttcctgtaccagtttaagcatgaaaaggatacagtgttactt
tgggctcagaagcaaaaggaatgtccagtagagatcaatccttgggctgtggtgggtggg
atactgggtgctgtggtgcttgtgggcctgctgctgctcatagcctggaaggttgtcact
catttcaaagacaagcgagagtatgaaaacttcatgaaaaacaagagcatggcaatctgg
agtgagaatgtgagtccattatacaagccagccactactatggttaaaaaccctctgttt
gagtcaacttccactggtcaaaattaa
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