Scylla paramamosain (green mud crab): 135115861
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Entry
135115861 CDS
T11531
Name
(RefSeq) ran GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135115861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sprm03019
]
135115861
Messenger RNA biogenesis [BR:
sprm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
135115861
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
RanGAP1_C
LRR_4
CDC45
Nop14
Sigma70_ner
Sporozoite_P67
Cwf_Cwc_15
Myc_N
FAM176
DNA_pol_phi
Motif
Other DBs
NCBI-GeneID:
135115861
NCBI-ProteinID:
XP_063888969
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Position
30:13089299..13102086
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AA seq
558 aa
AA seq
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MATTLSFSGKNHKWDTAEDAQPVVDAILAASDLHCLALDGNTLGVEAARVIGDALAAHPE
FERAHWKDLFTGRLKSEIPDALRHLFSGLVRAGAKLKELDLSHNALGPVGVEGMVDFMSS
PVCYSLEELRLDNNGLGIKGGTMLAQSLLKLVENAKAANTPLKLKVFISGRNRLENEGAE
MFAKFFKAVGTLEHVAMPQNGIFHVGIAALASAFSMNPDLRIINLNDNTFTPKGAKAMAE
KLPTMQNLEVIDFGDCLLKTAGAKYIADALTDTHTKLQELRLDSNEIGVNGGLSVANAMV
NKDNLKVLNLDSNQFGAEGRENIVIVLQDIGRLDSLETLENDENTASEDEDSDEEEDSDD
DEEEEEEEDVQELEPSGVSPLKRADAVIQPVKATAAEFRAQPTAARLLGLGNSGPSQLVE
EARQLSKGSQEEFIFHCFGLMMRTASLATSNNKQVQEAVKTATDQLAQAVFAEEPKDDLS
SVATNSLLIHLGLIKCEDKKFKLEWDLRGCLLTLAAIVKHSAFPDHTKNALQLFLSRPNS
KIDAYIQEKHRLMTAIFQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggctaccacactcagcttctcagggaaaaaccacaaatgggacaccgcagaggacgcc
cagccagtggttgacgccatacttgctgcgtccgacctccactgcctggccctggatggc
aatacgctgggggtggaggctgctcgggtcattggggatgccttggctgcccatcctgag
tttgagcgagcccactggaaggaccttttcacgggccgcctcaagtcagaaatacccgat
gccctgaggcacctattttcgggactggtgagggctggagcaaagctgaaggaactggac
ctgagccacaatgcccttggaccagtgggtgtggaaggcatggtggacttcatgtcttcc
cctgtctgttattcgcttgaggagctacgtctggacaacaatgggctgggcatcaagggt
ggtaccatgctggctcagtccctcctgaagctggtggagaatgccaaggctgccaacact
cctctcaagctgaaggtgttcatctcaggacgtaacaggcttgagaatgagggtgcagag
atgtttgccaagttcttcaaagcagtgggcaccctggagcatgtagccatgccccagaac
ggcatattccatgtgggcatagcagctcttgcttctgccttcagtatgaaccctgaccta
aggataatcaaccttaatgacaacaccttcacccctaagggagcaaaggccatggcagaa
aagttgcccaccatgcagaatctagaggttattgactttggtgattgtctgttgaagaca
gcaggtgccaagtacattgctgatgccctgacagacacccataccaagctgcaggagctg
cgtttggacagcaatgagataggagtgaatggaggtctatcggtggccaacgctatggtc
aataaagacaacctgaaggttctcaacttggatagcaatcagtttggggcggaaggacgg
gagaacattgttattgttctgcaagacattgggcgccttgactccctggagactctggag
aatgatgagaacactgccagtgaggatgaggactcagatgaggaagaggatagtgatgat
gatgaggaggaagaggaggaggaagatgttcaagaattggagccatctggtgtgagtccc
ttgaagcgggcagatgcagtaatccagccagtcaaggccacagcagctgagttcagggca
cagccaacagcagcacgcctcttgggtctaggaaattctggtccctcacagctggtggag
gaggcaaggcagctgtctaaagggtctcaggaggagttcatctttcactgctttggtctc
atgatgcgcactgcctcccttgccacctccaataacaaacaggtacaagaggctgtaaag
actgctactgaccagcttgcccaggcggtctttgctgaagaaccaaaggatgatctctcc
tctgttgccaccaactccctgctcatccaccttggtctcatcaagtgtgaggataaaaag
ttcaagctggagtgggacctgcggggctgcctcctcaccctggcagccattgtgaagcac
tctgcctttccagaccacaccaagaatgccctgcaactgttcctttccagacctaactcc
aagattgatgcgtatatccaagaaaagcacaggctcatgacagccatcttccagtaa
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