Scylla paramamosain (green mud crab): 135115926
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Entry
135115926 CDS
T11531
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
sprm Scylla paramamosain (green mud crab)
Pathway
sprm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135115926
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sprm01002
]
135115926
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sprm04121
]
135115926
03036 Chromosome and associated proteins [BR:
sprm03036
]
135115926
03400 DNA repair and recombination proteins [BR:
sprm03400
]
135115926
Peptidases and inhibitors [BR:
sprm01002
]
Metallo peptidases
Family M67
135115926
Ubiquitin system [BR:
sprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
135115926
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
135115926
BRISC complex
135115926
Chromosome and associated proteins [BR:
sprm03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
135115926
DNA repair and recombination proteins [BR:
sprm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
135115926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
BRCC36_C
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
135115926
NCBI-ProteinID:
XP_063889131
LinkDB
All DBs
Position
30:complement(16409932..16468555)
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AA seq
272 aa
AA seq
DB search
MWVSQVRLAVDAYLVCLHHALTTEKEEVMGLLVGEFSEGKEVVCDIHSAVTLRRSDKRKD
RVEISPEMLIEAQQRAEQMSASSGKELHIVGWYHSHPHITVWPSDIDLQTQAGYQQMDSH
FIGLIFSVYNEDKKTKIGNHQVTCFQASNQSPEGEPPQYVRLPVPIEILSTPILATNNQQ
ALDNLCSTLHEEQSEFLQLSRQQAGEDPLTHLHNIAVMVQSVCRLSSLVLGPLVSRVEEQ
LSHVLTTTKYLKQEEAHMKKLPAENNVALPDP
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgtcgcaggtccggctggcggtggatgcctaccttgtgtgtctccaccacgcc
ctcaccacagagaaggaggaagtgatgggtctgctggttggggagttcagtgagggaaaa
gaagtggtctgtgacatccactcagccgtgacactcaggaggtcagacaagaggaaggac
cgagtagagatatctccagagatgttaattgaggcacagcagagagcagagcagatgtca
gcatcaagtggaaaggaactgcacattgttggctggtaccactcacaccctcacatcact
gtgtggccttctgatatcgatctgcagacccaagccggctaccagcagatggacagtcac
ttcataggactcatcttctctgtctataatgaagacaaaaagaccaagataggcaaccat
caagtgacatgcttccaagccagcaaccagagccccgaaggagagccgcctcagtatgtg
cgccttcctgtgcccattgagatcctgtccaccccaatcctggccaccaacaaccagcaa
gccttagataatctgtgttctacgcttcatgaggaacagagtgaatttctgcaactgtcc
cgtcaacaagcaggagaagaccccttgactcacctccacaatattgcagtgatggtgcag
agtgtgtgtaggctgagcagtctggttctggggccgttggtgtctcgtgtggaggagcaa
ctcagtcacgtcctcaccaccacaaaatacctcaagcaggaggaggcacacatgaagaaa
ttacctgctgaaaacaatgttgctcttcctgacccatag
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