Spiroplasma sp. NBRC 100390: S100390_v1c02720
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Entry
S100390_v1c02720 CDS
T05859
Symbol
cbf
Name
(GenBank) 3'-5' exoribonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sprn
Spiroplasma sp. NBRC 100390
Brite
KEGG Orthology (KO) [BR:
sprn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sprn03019
]
S100390_v1c02720 (cbf)
Messenger RNA biogenesis [BR:
sprn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
S100390_v1c02720 (cbf)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
APE13085
UniProt:
A0A1J0TZY6
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All DBs
Position
289579..290520
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AA seq
313 aa
AA seq
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MNIKDLTKETNNVELVVIADKVTQGTASNGSTYLSITLKDRTGTIEARLWDARPADIDCW
IKGNCYKVNINIIEYRKVLQAKINTYDIIDNDSINLEDFIEVAPLSPDVMYDEIITTVQA
MQTVEYREIMTLILTKYGEQFKIWPAAVRNHHEIKSGLIWHSLTMLKMAKNVANVYSDRL
IDAELLYCGVILHDLGKVIEITSGATNDFSLEGKLLGHISIMANELNHLAKINNLSSKKI
ILLEHMILASHGRLEYGSPVEPHLLEAEILSFLDNLDARIYRIDKELEKMPVNEQTQRLL
AVEGRWFLKHFEK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaatattaaagacttaacaaaagagaccaataatgttgaattagtggtaattgctgat
aaagtaacacaaggaactgcttctaacgggagcacttatttgtcaataacattaaaagat
cgtaccggaacaattgaagctcgtctatgagatgctcgtcctgctgatattgactgttga
attaaaggtaattgttataaagtaaatattaatattattgaatatcgaaaagtattacaa
gcaaaaattaatacttatgacattattgataatgatagtattaatttagaagattttatt
gaagtagcaccactttcacctgatgtaatgtatgatgaaattattactacagtgcaagca
atgcagacagtagaatatcgtgaaattatgactttaattttaacaaaatatggtgaacaa
tttaaaatttgaccagcagcagttcgcaaccatcatgaaattaagtcgggattaatttga
cacagtttaacaatgttaaaaatggctaaaaatgttgccaatgtatattctgaccggtta
attgatgctgaacttttatattgtggggttatcttacatgatttaggaaaagttattgaa
attacaagtggggcaactaatgatttttcattagagggaaaattactgggtcatatttca
attatggcgaatgaattaaaccatctcgctaaaattaataatttaagttctaaaaaaatt
attttattagaacatatgattttagctagtcatggccgtttagaatatgggtcaccagtt
gaaccgcatttattagaagctgaaattttatcatttttagataatttagatgctcgaatt
tatcgaattgataaggaattagaaaaaatgccagttaatgaacaaacacagcggttatta
gctgttgaaggtcgctgattcttaaagcattttgaaaaataa
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