Spiroplasma sp. NBRC 100390: S100390_v1c02780
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Entry
S100390_v1c02780 CDS
T05859
Symbol
pdhD
Name
(GenBank) pyruvate dehydrogenase E3 component
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sprn
Spiroplasma sp. NBRC 100390
Pathway
sprn00010
Glycolysis / Gluconeogenesis
sprn00020
Citrate cycle (TCA cycle)
sprn00260
Glycine, serine and threonine metabolism
sprn00280
Valine, leucine and isoleucine degradation
sprn00620
Pyruvate metabolism
sprn00630
Glyoxylate and dicarboxylate metabolism
sprn00640
Propanoate metabolism
sprn00670
One carbon pool by folate
sprn00785
Lipoic acid metabolism
sprn01100
Metabolic pathways
sprn01110
Biosynthesis of secondary metabolites
sprn01120
Microbial metabolism in diverse environments
sprn01200
Carbon metabolism
sprn01210
2-Oxocarboxylic acid metabolism
sprn01240
Biosynthesis of cofactors
Module
sprn_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sprn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
S100390_v1c02780 (pdhD)
00020 Citrate cycle (TCA cycle)
S100390_v1c02780 (pdhD)
00620 Pyruvate metabolism
S100390_v1c02780 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
S100390_v1c02780 (pdhD)
00640 Propanoate metabolism
S100390_v1c02780 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
S100390_v1c02780 (pdhD)
00280 Valine, leucine and isoleucine degradation
S100390_v1c02780 (pdhD)
00310 Lysine degradation
S100390_v1c02780 (pdhD)
00380 Tryptophan metabolism
S100390_v1c02780 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
S100390_v1c02780 (pdhD)
00670 One carbon pool by folate
S100390_v1c02780 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sprn04147
]
S100390_v1c02780 (pdhD)
Enzymes [BR:
sprn01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
S100390_v1c02780 (pdhD)
Exosome [BR:
sprn04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
S100390_v1c02780 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox_3
Pyr_redox
GIDA
FAD_binding_2
FAD_oxidored
HI0933_like
NAD_binding_8
AlaDh_PNT_C
Thi4
FAD_binding_3
3HCDH_N
DAO
GDI
Motif
Other DBs
NCBI-ProteinID:
APE13091
UniProt:
A0A1J0TZY2
LinkDB
All DBs
Position
296550..297935
Genome browser
AA seq
461 aa
AA seq
DB search
MENKYDVIVVGAGPGGYVAAIKAAQEGLKTLIIEKEYYGGVCLNVGCIPTKALLKSSKVY
DLIGHADTYGIDISKMTEVAPNWIKMQERKAKVVTQLTKGVEFLLKKNKVDLVKGEAKAI
DKNTIEVAGKRYTGTNLIIATGSVSRNLPLPGFEQAEKEGYVISSTEALSLPKIPKKLAI
IGGGVIGIEFACLYRRLGTEVTILQGLDTILEMLDKDIREELTKLLIKNKVKIETSVKIK
EIKGKTVIYDDSEGKEVKLATDYCLVSVGRVPVTTGFENIGLKIGERKNIEVDDQCRTNL
PGVYAIGDVVGRAMLAHVASAQGLLVINNIKGQNEKMNYNRIPSCIYSFPEVATVGITEE
QAIKDKIAYKAFKFPLSANGKALADGETDGFVKILCEPKYGEILGAHIIAATATDMISEI
TVCMETEGTIHEFGKAIHPHPTLSEVLMEVAHGLEGHAIHI
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaatatgatgtaattgttgtcggagctggtccgggtggatatgttgcggca
attaaagcagcccaagaaggtttaaaaacattaattattgaaaaagaatattatggtggt
gtttgtttaaacgttggttgtattccaacaaaagcgttattaaaaagtagtaaagtttat
gatttaattggtcatgctgatacttatgggattgatatttcaaaaatgacagaagttgcc
ccaaattgaatcaaaatgcaggaacgaaaagcaaaggtggtaacgcaattaacaaaaggg
gttgaattcttattgaaaaaaaataaggtggacctagttaaaggtgaagctaaagcaatt
gataaaaatacgattgaagtagcgggaaaacgttatacaggtacaaatttaattattgca
acaggaagtgtttcacgtaatttaccattaccaggatttgagcaagcggaaaaagaaggt
tatgttatttcatcaacagaagctttatcattaccaaaaattccaaaaaaactagcaatt
attggtggtggtgttattggaattgaatttgcgtgtttgtatcgtcgtttaggaacagaa
gtaacaattttacaaggtttagatacaattttagaaatgttagataaagatattcgtgaa
gagttaacaaaactattaattaaaaataaagttaaaattgaaacatctgttaaaattaaa
gaaattaaaggtaaaacagttatttatgatgatagtgaaggcaaagaagttaaattagca
actgattattgtttagtatcagttgggcgtgtacctgttacaactggttttgagaatatt
ggtttaaaaattggtgaacgaaaaaatattgaagttgatgatcaatgccgtactaattta
ccgggcgtttatgccattggggatgttgttggaagagcaatgttagcccatgttgcttca
gcacaaggacttttagtaattaacaatattaaaggacaaaatgaaaaaatgaattataat
cgaattccatcatgtatttattcatttccagaagttgcaacagttgggattaccgaagaa
caagcgattaaagacaaaattgcttataaagcctttaaattccccttatcagctaatgga
aaagcattagctgatggtgaaactgatgggtttgttaaaattttatgtgaaccaaaatat
ggtgaaattttaggagcacatattattgctgcaacagcaactgatatgatttcagaaatt
actgtttgtatggaaacagaaggaacaattcatgaatttggaaaagcaattcatccgcat
ccaactttatcagaagttttaatggaagttgcccatggattagaaggacatgctattcat
atttaa
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