Spiroplasma sp. NBRC 100390: S100390_v1c03300
Help
Entry
S100390_v1c03300 CDS
T05859
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sprn
Spiroplasma sp. NBRC 100390
Pathway
sprn02024
Quorum sensing
sprn03060
Protein export
sprn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sprn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
S100390_v1c03300 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
S100390_v1c03300 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
S100390_v1c03300 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sprn02044
]
S100390_v1c03300 (ffh)
Enzymes [BR:
sprn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
S100390_v1c03300 (ffh)
Secretion system [BR:
sprn02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
S100390_v1c03300 (ffh)
Eukaryotic Sec-SRP protein
S100390_v1c03300 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
Zeta_toxin
CbiA
AAA_17
cobW
Arf
AAA_19
ResIII
NB-ARC
MMR_HSR1
AAA_16
SRPRB
AAA_33
6PF2K
AAA_5
AAA_30
Lip_prot_lig_C
DUF4175
G-alpha
Motif
Other DBs
NCBI-ProteinID:
APE13143
UniProt:
A0A1J0U046
LinkDB
All DBs
Position
356446..357804
Genome browser
AA seq
452 aa
AA seq
DB search
MIGDFLANRLKKSIEKNMKKSTLTSDAISETMREIRLALLEADVNNEVVKDFIKAVETKA
RGEYISDGLNASQMMVKIVHEELVNIFGKTTKELSFASKPTIVMMVGLQGSGKTTTTGKI
AKLVEKKYQKKPLLVACDIYRPAAIDQLKTIGKNLNLEVFERGTQNPVQTAQEAVTYAKE
IKNDVILIDTAGRLHIDAELMQELKEIKNNITPDEILLVVDGMTGQDIINVATEFNQLLK
LTGVVVTKLDGDARGGAALSITHLTKLPITFIGTGEGMSSLQIFYPDRMADRILGMGDVQ
TLVEKAKDVLDERDIKKTMNRMMMGQFDLQDLLNQMRQISKMGKMGGIMKLLPGMPKMSD
EKIADAERKLKATEVLLSSMTVKERREPRLLKHLSRKNRILKGSGRTEKEYNELINQFEK
TKKQVDEIARQIKSGRMPNIPGMGGLSGMGFN
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgattggagactttttagcaaatcgattgaaaaaatcaattgaaaaaaatatgaaaaaa
tcaactttaactagtgatgctattagtgaaacaatgcgggaaattagattggcattatta
gaagcggatgttaataatgaagtggtaaaagattttattaaggcagtagaaacaaaagcc
cgcggagaatatatttccgatggtttgaatgcatcacagatgatggttaaaattgttcat
gaagaattggttaatatttttgggaaaacaacgaaggaattatcttttgcttcaaaacca
acaattgttatgatggttggattacaagggagtgggaaaacgacaaccactggtaaaatt
gccaaattagtggaaaaaaaatatcaaaaaaaaccattattggtagcttgtgatatttat
cgtcccgcagcaattgatcagttaaaaacaattggaaagaatctaaatcttgaagtattt
gaacgaggaacacaaaatcccgttcaaacagcgcaagaagcagttacttatgcaaaagaa
attaaaaatgatgttattttaattgatactgctggtcgtttgcatattgatgcggaatta
atgcaagaattaaaagaaattaaaaataatattactcctgatgaaatcttacttgttgtt
gatggaatgacaggacaagatattattaatgttgcaacagaatttaatcaattgttaaag
ttaaccggagttgttgttactaagttagatggtgatgctcgtgggggagcagcattatca
attactcatttaaccaaattgccaattacttttattgggactggagagggaatgagtagt
ttacaaattttttatcccgaccgaatggcagatcgaattttgggaatgggagatgttcaa
actctagttgaaaaggcaaaagatgttttagatgaacgtgatattaaaaaaacaatgaat
cgaatgatgatgggacaatttgatttacaagatttgttaaatcaaatgcgacaaatctca
aaaatgggaaaaatgggtggaattatgaaattattgcctggaatgccaaaaatgagtgat
gaaaaaattgctgatgcagaacgtaaattaaaagcaacagaagtcttattatcttcaatg
acagttaaagaacgtcgtgaaccgcggttgttaaaacacttatcacgaaaaaatcggatt
ttaaaaggttcggggcggacagaaaaagaatataatgagttaattaatcaatttgaaaaa
acaaaaaaacaagttgatgagattgctcgccaaattaaatctggtcgtatgccaaacatt
ccgggaatgggtggtttaagcggaatgggttttaattaa
DBGET
integrated database retrieval system
