KEGG   Spiroplasma sp. NBRC 100390: S100390_v1c03510
Entry
S100390_v1c03510  CDS       T05859                                 
Symbol
cshB
Name
(GenBank) ATP-dependent RNA helicase CshB
  KO
K18692  ATP-dependent RNA helicase CshB [EC:5.6.2.7]
Organism
sprn  Spiroplasma sp. NBRC 100390
Brite
KEGG Orthology (KO) [BR:sprn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sprn03019]
    S100390_v1c03510 (cshB)
   03009 Ribosome biogenesis [BR:sprn03009]
    S100390_v1c03510 (cshB)
Enzymes [BR:sprn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     S100390_v1c03510 (cshB)
Messenger RNA biogenesis [BR:sprn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     S100390_v1c03510 (cshB)
Ribosome biogenesis [BR:sprn03009]
 Prokaryotic type
  rRNA helicases
   S100390_v1c03510 (cshB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_7
Other DBs
NCBI-ProteinID: APE13164
UniProt: A0A1J0U054
LinkDB
Position
382305..383687
AA seq 460 aa
MNNFDKLGLKRFLNLGLEQLNFTEPTMVQEKVIPLLLKHQNVICKAHTGTGKTFAFCLPI
LNNLDYEQSSIQSIIVTPTRELAKQIYDNIRFFKTFQPALQVNCFVGGEDIKRQIEQLER
NQPHIMVVTPTRLKDLFDQQSLKLGKLTTFIIDECDMIFDLGFIENVDYLLSKVNPNVQV
SVFSATIPEVLKPFLIKYLKNPHYLDLNANQITNQNITHILIPTKHQERSTILLKLLKTF
DPYLCLIFVNKKEEINKYYDLLLEHNYSVTQLHAGLEPRLRTQVVKRIRNLEYKYVIASD
IAARGIDFVGVSHIISIDLPNDLEYYIHRSGRTGRANYTGYSYALYDTKNLTLVEQLIAK
GIAFKYQKWNQVNELVDIDLVINKPKKQNSEQVNNEINKIIHRYKTKDNNKKIKPGYKKK
RKEEIAALKKQIRRDHIKASIKKIKKEKAKERGIKLFDKE
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgaataattttgataagttaggtttaaaacgatttctaaatttaggtttggaacaatta
aattttacagaaccaacaatggtacaagaaaaagttattccattgttattaaaacatcaa
aatgttatttgcaaagctcatactggaactggcaaaacttttgcattttgtttaccgatt
ttaaataatttagattatgaacaatcaagcattcagtcaattattgtgacaccaacccgt
gagttagcaaaacaaatttatgataacattcgtttttttaaaacatttcaaccagcatta
caagttaattgctttgttgggggagaagacattaaacggcaaatagaacagttagaacga
aatcaaccgcatatcatggttgtaacaccaacacggttaaaggatttgtttgatcaacaa
agtttaaaattaggaaagttaacaacatttattattgatgaatgtgatatgatttttgat
ttaggttttattgaaaatgttgattatcttttaagtaaagttaatcctaacgttcaagtt
tctgtattttcagcaacaattccagaagtgttaaaaccatttttaataaaatatttaaaa
aatccgcattatttggatttaaatgctaatcaaataactaaccaaaatattacgcatatt
ttaattccaactaagcatcaagaacgaagtactattttattaaaacttttaaaaacattt
gatccttatttgtgtttgatttttgttaataagaaagaagaaattaataaatattatgat
ttattattagaacataattattcagtaacccaattgcatgctggtttagaaccacggtta
cgaactcaagttgtaaaacgaattcgtaatttagaatataagtatgttattgctagtgat
attgcggcgcgaggaattgattttgttggagtaagtcatattatttcaattgatttacca
aatgacttagaatattatattcatcgtagtgggcgaactggacgggcaaattatactggt
tatagttatgctttgtatgatacaaaaaatttaacgctggttgaacaattaattgcaaag
ggaattgcttttaagtatcaaaaatgaaatcaggtgaatgaattagttgatattgattta
gtgattaataaaccaaaaaaacaaaattcagaacaagttaataatgaaattaataaaatt
attcatcgttataaaacaaaagataataataaaaaaattaaacctggttataaaaagaaa
cgaaaagaagaaatcgcggcgttaaagaaacaaattcgtcgtgatcatataaaagcatca
attaagaaaattaaaaaagaaaaagcaaaagaacgggggattaaattatttgataaagaa
taa

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