Spiroplasma sp. NBRC 100390: S100390_v1c03960
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Entry
S100390_v1c03960 CDS
T05859
Name
(GenBank) hypothetical protein
KO
K03530
DNA-binding protein HU-beta
Organism
sprn
Spiroplasma sp. NBRC 100390
Brite
KEGG Orthology (KO) [BR:
sprn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sprn03032
]
S100390_v1c03960
03036 Chromosome and associated proteins [BR:
sprn03036
]
S100390_v1c03960
03400 DNA repair and recombination proteins [BR:
sprn03400
]
S100390_v1c03960
DNA replication proteins [BR:
sprn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
S100390_v1c03960
Chromosome and associated proteins [BR:
sprn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
S100390_v1c03960
DNA repair and recombination proteins [BR:
sprn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
S100390_v1c03960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
PH_40
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
APE13209
LinkDB
All DBs
Position
434294..434593
Genome browser
AA seq
99 aa
AA seq
DB search
MKKKNLNKNDIAEFIRLEYDITKTTSRSLVNEVFNFLETQLKNGQTITVTGFGKFYVKPN
LRLNNQMHGKKYNKKAKYTVKFSASSKFNKNYRKGEINE
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaaaatcttaataaaaatgatatagcagaatttattagattagaatatgat
ataacaaaaacgacaagtcgtagtttagtcaatgaagtatttaattttttagaaacacaa
ttaaaaaatggtcaaactataacagttactggttttggaaaattttatgttaaaccaaat
ttacgtttaaataaccaaatgcatggtaaaaaatataataaaaaagcaaaatatactgta
aaattttcagcttcaagtaagtttaacaaaaactatagaaagggtgaaataaatgagtaa
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