Spiroplasma sp. NBRC 100390: S100390_v1c04620
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Entry
S100390_v1c04620 CDS
T05859
Symbol
oppD
Name
(GenBank) oligopeptide ABC transporter ATP-binding protein
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
sprn
Spiroplasma sp. NBRC 100390
Pathway
sprn02010
ABC transporters
sprn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sprn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
S100390_v1c04620 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
S100390_v1c04620 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
S100390_v1c04620 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprn02000
]
S100390_v1c04620 (oppD)
Transporters [BR:
sprn02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
S100390_v1c04620 (oppD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
TniB
AAA_22
SMC_N
AAA_16
RNA_helicase
Cucumo_coat
DEAD
PRK
AAA_29
ATPase
Motif
Other DBs
NCBI-ProteinID:
APE13275
LinkDB
All DBs
Position
520559..522262
Genome browser
AA seq
567 aa
AA seq
DB search
MKKEIVISIKKLVIKFKTRANVLTAIRNISFDIYDGETLAIVGESGSGKSVMTKTFTNML
ENNGWISNGAIVYSPSTNILADELTYFKKPVHLVDFHKILLDSSLRKSIIKYNKKLIAKT
EQKIKIINSLQLETVKTELTQLKTKEQELKKQINFTHSNRLNNKLVKISTQLKSMQKNQT
MLLDSELKAKNIELLQSRITDYANEISKMKNLTWVEKHLLNKNMLFLKKYFEEQIVPTDE
EFKNIRTYFSKTIFTDGVRYRINKMNLLMFSEQPLNVRDFNNLWEEWSLIKNFGFINKLK
AAKQISKLRGQTIATIFQDPMTSLNPLLSVGFQISEVLRKHRKFSRSAAKKLAIELLEKV
GISNAKKRYHDIPGMYSGGMRQRVVIAIALACQPKVLICDEPTTALDVTIQAQILDLIKE
LQKEYKFTIIFITHDLGVVANIADRVAVMYAGQIIEYGTVNEIFFDPKHPYTWALLSSLP
QFGEKGEELYSIPGSPPSLYAKVYGDPFAPRNQYAMKIDYLLEPPMFKVTETHYAKTWLL
DPRATKVEKPKQLRQLEKLKNDAKVGD
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaaattgtaatttcaattaaaaaattagttataaagtttaaaactcgagcg
aatgttttaacagcaattcgtaacatttcatttgatatttatgatggtgaaacattggca
attgttggagaatcgggaagtggaaagtcagtaatgacaaaaacttttacaaatatgtta
gaaaataatggctgaattagtaatggggcaattgtatattcaccatcaactaatatttta
gccgacgagttaacttactttaaaaaaccagtccacttagttgattttcataaaatttta
ttggatagtagcttacgaaaaagtattattaaatataataaaaaattaattgcaaaaaca
gaacaaaagattaaaataatcaatagtttacaattagagacagttaaaacagaacttaca
cagttaaaaacaaaagaacaagaattaaaaaagcaaattaattttacacattcaaatcgt
ttgaataataaattagtaaaaattagtactcaattaaaaagtatgcaaaagaatcaaaca
atgttattggattctgaacttaaagcgaaaaatattgaattgttgcaaagtcgaattact
gattatgctaatgaaattagtaagatgaaaaatttaacatgagtagaaaaacatttatta
aataaaaatatgttgtttttaaaaaaatattttgaagagcaaatagttccaaccgatgaa
gaatttaaaaatattagaacttattttagtaaaacaatttttactgatggtgttcgttat
cgaattaataaaatgaatcttttaatgttttcagaacaaccattaaatgttcgtgatttt
aataatttgtgagaagaatgaagtctaattaaaaattttggatttattaacaaattaaaa
gcggcaaaacaaattagtaagttacgaggacaaacaattgcaacaatttttcaagatcca
atgacatctttgaatccattattatcggttgggtttcaaatttcagaagtattacgaaaa
catcgtaagttttctcgttcagcagcaaaaaaacttgcgattgaattattagaaaaagtt
ggaatttcaaatgcaaaaaaacgttaccatgatattccaggaatgtattcagggggaatg
cgtcaacgggttgttattgcgattgcattagcttgtcaaccaaaggttttaatttgtgat
gaaccaacaactgctttggatgtaacaattcaagctcaaattttagatttaattaaagaa
ttacaaaaagagtataaatttacaattatttttattactcatgacttaggagttgttgcg
aatatcgctgatcgggtagctgtaatgtatgccgggcaaattattgaatatggtactgtt
aatgaaatcttttttgatccaaaacatccttatacatgagctttattatcttcattacca
caatttggagaaaaaggtgaagaactttattcaattcctggttcaccaccgtcgctatat
gctaaagtttatggtgacccctttgcaccacgaaatcaatatgcgatgaaaattgattat
ttattagaaccaccaatgtttaaagtaactgaaacccattatgcaaaaacatgattatta
gatccacgagcaacaaaagtggaaaaaccaaaacaattacgacagttggaaaaacttaaa
aatgatgcaaaggtaggtgattaa
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