KEGG   Spiroplasma sp. NBRC 100390: S100390_v1c06530
Entry
S100390_v1c06530  CDS       T05859                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
sprn  Spiroplasma sp. NBRC 100390
Brite
KEGG Orthology (KO) [BR:sprn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sprn03016]
    S100390_v1c06530 (truB)
Enzymes [BR:sprn01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     S100390_v1c06530 (truB)
Transfer RNA biogenesis [BR:sprn03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    S100390_v1c06530 (truB)
 Prokaryotic type
    S100390_v1c06530 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 DUF6501
Other DBs
NCBI-ProteinID: APE13460
UniProt: A0A1J0U128
LinkDB
Position
complement(746028..746939)
AA seq 303 aa
MHDGIFLINKPAGKTSNQIIQDIKKTLMIKKIGHAGTLDPLATGLLVVLVNNATKMSEYL
LTADKAYDVEMQLFVETDTGDITGNVVKEVPPFKLRKKQLKKIFSEFNGFMYEQYPPKYS
AIKVNGKKLYEYARRDEVVEIKPRTVTIKEIKLKKYNHHDHTITFSVLCTKGTYIRSLVM
DLAAKLNTIATVKSLCRTQSGNFLLSKAIAPEEVNFDRLISMYDALFTNKQQLLLYHYDE
EIRQGKPIVIINHTDPIIFIIDKNKNVLAIYKHIGKHVYACQRGLWANIDINQQQKIDKD
DHY
NT seq 912 nt   +upstreamnt  +downstreamnt
atgcatgatggtatttttttaattaataaaccagctggaaaaacaagtaatcaaattatt
caagatattaagaaaaccttgatgattaaaaaaattggccatgctggaactttagaccct
ttagcaacaggtcttttggtggtattagtcaataatgcgactaaaatgagtgaatatttg
ttaacagcagataaagcttatgatgttgaaatgcaattatttgttgaaacagatactggt
gatattactggcaatgttgttaaggaagtgcccccctttaagcttcgtaagaaacaatta
aagaaaatttttagtgaatttaatggatttatgtatgaacaatatcctcctaaatattct
gctattaaagttaatggtaaaaaactttatgaatatgctcgccgcgatgaagtagttgaa
attaaaccacgaacagttacaattaaagaaattaagttgaaaaaatataatcatcatgac
catactattacatttagtgttttatgtaccaaaggaacatatattcgtagtttggttatg
gaccttgccgcaaaattaaatacaattgcaacggttaaaagtttatgtcgaacgcaatca
gggaattttttgttatcaaaagcaattgctcccgaagaagtaaattttgatcgcttaatt
tcaatgtatgatgccttgttcacaaataaacagcagttattactttatcattatgatgaa
gaaattagacaaggaaaaccaatagttattattaatcatacagatccaattatttttatt
attgataaaaacaaaaatgttttagcaatttataaacatattggtaaacatgtttatgct
tgtcagcgggggttatgggcaaatattgatattaaccaacaacaaaaaatagataaggat
gatcattattaa

DBGET integrated database retrieval system