Spiroplasma sp. NBRC 100390: S100390_v1c06530
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Entry
S100390_v1c06530 CDS
T05859
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sprn
Spiroplasma sp. NBRC 100390
Brite
KEGG Orthology (KO) [BR:
sprn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sprn03016
]
S100390_v1c06530 (truB)
Enzymes [BR:
sprn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
S100390_v1c06530 (truB)
Transfer RNA biogenesis [BR:
sprn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
S100390_v1c06530 (truB)
Prokaryotic type
S100390_v1c06530 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF6501
Motif
Other DBs
NCBI-ProteinID:
APE13460
UniProt:
A0A1J0U128
LinkDB
All DBs
Position
complement(746028..746939)
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AA seq
303 aa
AA seq
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MHDGIFLINKPAGKTSNQIIQDIKKTLMIKKIGHAGTLDPLATGLLVVLVNNATKMSEYL
LTADKAYDVEMQLFVETDTGDITGNVVKEVPPFKLRKKQLKKIFSEFNGFMYEQYPPKYS
AIKVNGKKLYEYARRDEVVEIKPRTVTIKEIKLKKYNHHDHTITFSVLCTKGTYIRSLVM
DLAAKLNTIATVKSLCRTQSGNFLLSKAIAPEEVNFDRLISMYDALFTNKQQLLLYHYDE
EIRQGKPIVIINHTDPIIFIIDKNKNVLAIYKHIGKHVYACQRGLWANIDINQQQKIDKD
DHY
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatggtatttttttaattaataaaccagctggaaaaacaagtaatcaaattatt
caagatattaagaaaaccttgatgattaaaaaaattggccatgctggaactttagaccct
ttagcaacaggtcttttggtggtattagtcaataatgcgactaaaatgagtgaatatttg
ttaacagcagataaagcttatgatgttgaaatgcaattatttgttgaaacagatactggt
gatattactggcaatgttgttaaggaagtgcccccctttaagcttcgtaagaaacaatta
aagaaaatttttagtgaatttaatggatttatgtatgaacaatatcctcctaaatattct
gctattaaagttaatggtaaaaaactttatgaatatgctcgccgcgatgaagtagttgaa
attaaaccacgaacagttacaattaaagaaattaagttgaaaaaatataatcatcatgac
catactattacatttagtgttttatgtaccaaaggaacatatattcgtagtttggttatg
gaccttgccgcaaaattaaatacaattgcaacggttaaaagtttatgtcgaacgcaatca
gggaattttttgttatcaaaagcaattgctcccgaagaagtaaattttgatcgcttaatt
tcaatgtatgatgccttgttcacaaataaacagcagttattactttatcattatgatgaa
gaaattagacaaggaaaaccaatagttattattaatcatacagatccaattatttttatt
attgataaaaacaaaaatgttttagcaatttataaacatattggtaaacatgtttatgct
tgtcagcgggggttatgggcaaatattgatattaaccaacaacaaaaaatagataaggat
gatcattattaa
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